Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1193 ATGAAGAAGAGTGAAAGTGGAGGGTATGTGAGAGCAGATCAGATAGATCTGAAGAGATTGGATGAGCAACTTCAGAGGCATCTTAGCAGAGCATGGACAATGGAGAAGAAGAGCAAGGAGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGTGAAGGAAGAAAGTCCACTTCAAGAACAAAGCAAGAGTGGGAGATTTATCCTTCTAAGCTTATTATAAAGACTGCCATTGCTCGTGGTACTTTTGGCACTGTTCATCGTGGGATTTATGATGGTCAAGATGTTGCAGTTAAGCTCCTTGATTGGGGAGAAGAGGGTCATCGGTCAGATGCTGAAATAGCTTCTCTTAGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGATCATCCTAATGTAACAAAGTTTCTTGGTGCAACAATGGGATCCTCAGAGCTACAAATACAAACAGAAAATGGTCATATAGGAATGCCAAGTAATGTTTGTTGTGTTATTGTTGAATATTGTCCTGGTGGTGCATTGAAGTCTTATCTGATTAAAAACCGGAGAAGGAAGCTTGCTTTCACAGTGGTTGTTCAACTTGCACTTGATCTCTCAAGAGGGTTGAGCTATCTCCACCTGAAAAAGATTGTTCATAGGGATGTTAAAACAGAAAATATGCTTCTTGACAAGGCAAGAACCTTGAAAATAGCTGATTTTGGAGTAGCTCGTATTGAAGCTTCTAATCCTCATGACATGACTGGTGAAACTGGCACCCTTGGTTACATGGCTCCTGAGGTTCTAAATGGTAATCCGTACAATAGAAAGTGTGATGTGTACAGTTTTGGTATATGCTTATGGGAGATATATTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCAGAAGTTACATCAGCTGTTGTAAGACAGAATCTAAGGCCAGAGATTCCGCAATGTTGTCCAAGTACACTAGCAAATGTGATGAAAAGATGTTGGGATGCCAATCCGGATAAGAGGCCACAGATGGATGAAGTAGTGACAATGTTGGAAGCTATTGACACTTCAAAGGGTGGAGGTATGATCCCTGATGATCAACCTCGGGGTTGTTTATGTTTCCGCCGATATCGAGGACCTTGA 1125 0.416 MKKSESGGYVRADQIDLKRLDEQLQRHLSRAWTMEKKSKEKEEEEEEEEECEGRKSTSRTKQEWEIYPSKLIIKTAIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTKFLGATMGSSELQIQTENGHIGMPSNVCCVIVEYCPGGALKSYLIKNRRRKLAFTVVVQLALDLSRGLSYLHLKKIVHRDVKTENMLLDKARTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPQCCPSTLANVMKRCWDANPDKRPQMDEVVTMLEAIDTSKGGGMIPDDQPRGCLCFRRYRGP* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1193 374 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 367 - -
Lan20g1193 374 Gene3D Transferase(Phosphotransferase) domain 1 171 355 - -
Lan20g1193 374 PRINTS Tyrosine kinase catalytic domain signature 168 181 IPR001245 GO:0004672|GO:0006468
Lan20g1193 374 PRINTS Tyrosine kinase catalytic domain signature 206 224 IPR001245 GO:0004672|GO:0006468
Lan20g1193 374 PRINTS Tyrosine kinase catalytic domain signature 272 294 IPR001245 GO:0004672|GO:0006468
Lan20g1193 374 PRINTS Tyrosine kinase catalytic domain signature 316 338 IPR001245 GO:0004672|GO:0006468
Lan20g1193 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lan20g1193 374 MobiDBLite consensus disorder prediction 31 59 - -
Lan20g1193 374 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 367 - -
Lan20g1193 374 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Lan20g1193 374 ProSiteProfiles Protein kinase domain profile. 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1193 374 Coils Coil 29 54 - -
Lan20g1193 374 CDD STKc_MAP3K-like 77 345 - -
Lan20g1193 374 SUPERFAMILY Protein kinase-like (PK-like) 56 345 IPR011009 -
Lan20g1193 374 Gene3D Phosphorylase Kinase; domain 1 59 154 - -
Lan20g1193 374 SMART serkin_6 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1193 374 PIRSF ILK 29 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1193 Lan-Chr20 17251936 17257504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1193 11 374 MAP Kinase Kinase Kinase AT3G22750 67.391 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan20g1193 PK_Tyr_Ser-Thr 2.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1193 - - gmx:100806635 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0047 5 529561 534358 Lan20g1193 20 17251936 17257504 LSH