Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1180 ATGTCTCCTTCTTCAATCTCTCATTTTCTCTCTGCAACAACTAACCCCAAAATGCATCACACCTTTCCTCTTCCACCTTCTCTCTCAACGCCACGTGTCATCCCCATATCCAACTTCCCTCTACTCTCTCATTCTTCTTCTTCATATCATTCTTCTTCTTCTTCTTTACTCTTCACTCCTCAAAACTCTTGTCTTTTTCTCTTCTTAACTCCAAAAATTTCATCTTTCACACTCCACGCTGCTTCTTCTTCTGTTCCTGACTCTAAAAGTGATGAACCCATCAAGCCAACTTCTACTCTCATTCATAACTTACACCTTGGAGCCATGTTTGGAACTTGGTACCTCTTGAATATTTACTTCAACATCTACAATAAACAGGTTCTAAAAGTATATCCATTTCCAGCAACAGTCACAGCATTTCAGTTTGGCTTTGCCACACTTATGATTAACTTAATATGGACTTTGAATCTCCATCCCAGACCCAAAATCACTGGCTCAAAGCTTGCATCAATCCTTCCATTGGCTGTGGCTCATACAATGGGGAACCTTTTGACCAATATCAGTCTTGGCAAGGTTGCTATATCATTCACTCACACAATCAAAGCTATGGAACCTTTGTTCACTGTTGTTCTTTCTTCTCTTTTACTGGGTGAGAGGCCCACTTTTTGGGTGGTTTCTTCCCTCATACCAATAGTAGGGGGAGTGGTACTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGTTTCAGTACTGCTATGGCATCTAACCTTACTAACCAATCACGGAATGTATTGAGCAAAAAGCTGATGACCAATGAAGAGGAAACTTTGGACAATATCAATCTCTACTCGGTTATAACCATCATTTCCTTTATCCTGTTGGTCCCATTTGCTATATTTTTGGAGGGTGTCAAGTTCACTCCTTCATACCTGCAATCTGCTGCAAGTCAAGGACTGAATGTTAGAGAGCTATGCATGAGATCAATTTTAGCTGGATTCTGCTTTCATGCATACCAGCAGGTATCATATGGAATATTAGAGCTGGTGTCACCTGTGAGCCACTCGGTTGGAAATTGTGTGAAGCGTGTGGTCGTCATAGCCTCTTCAGTTATCTTCTTCCAAACTCCTCTCTCACTCATTAACACACTTGGAACTGCTATTGCACTTGTTGGAGTTTTCTTATATTCAAGGGCAAAGCGGATAAAACCAATATTACCAAAGACAAAGACAGCATAA 1239 0.4076 MSPSSISHFLSATTNPKMHHTFPLPPSLSTPRVIPISNFPLLSHSSSSYHSSSSSLLFTPQNSCLFLFLTPKISSFTLHAASSSVPDSKSDEPIKPTSTLIHNLHLGAMFGTWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFATLMINLIWTLNLHPRPKITGSKLASILPLAVAHTMGNLLTNISLGKVAISFTHTIKAMEPLFTVVLSSLLLGERPTFWVVSSLIPIVGGVVLASMTEVSFNWIGFSTAMASNLTNQSRNVLSKKLMTNEEETLDNINLYSVITIISFILLVPFAIFLEGVKFTPSYLQSAASQGLNVRELCMRSILAGFCFHAYQQVSYGILELVSPVSHSVGNCVKRVVVIASSVIFFQTPLSLINTLGTAIALVGVFLYSRAKRIKPILPKTKTA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1180 412 PANTHER SOLUTE CARRIER FAMILY 35 63 404 - -
Lan20g1180 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 241 - -
Lan20g1180 412 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 404 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lan20g1180 412 Pfam Triose-phosphate Transporter family 105 397 IPR004853 -
Lan20g1180 412 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 63 404 - -
Lan20g1180 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 289 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1180 Lan-Chr20 16775387 16779169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1180 72 403 Antiporters AT3G01550 64.157 1.06e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1180 K15283 - gmx:100819280 569.311