Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1165 ATGTCACTAGAAGAGTCACTAAGATCTCTTTCCCTTGATTACCTAAACCTGCTCATCAATGGCCAAGCCTTCAGCGACATAACCTTCCAAGTAGAAGGCCATTTGGTCCATGCTCACCGCTGCATCTTGGCAGCAAGAAGCCTTTTCTTCAGGAAATTCTTCTGTGGTGCAGACCCGCCGTCGGGCTTAGACCCAACAGAAGGACCCTCTCGGGTCAACTCTGCAGGTACCGGGACAACGCCCAGACTATCCGGCGTCATCCCAGTGAACTCTGTGGGATATGAAGTGTTCTTGTTGCTCCTCCAGTTCCTGTACAGTGGACAAGTGTCTATTGTGCCTCAAAAGCATGAGCCAAGGCCTAATTGTGGGGAGAGAGGATGCTGGCACACGCATTGCACCTCAGCCGTTGATCTTGCCCTTGACACTCTTGCTGCGTCTAGATACTTTGGCGTTGAACAGTTGGCATTGCTCACTCAGAAACAACTATCCAGCATGGTAGAGAAAGCCTCTATTGATGATGTGATGAAAGTGCTCCTAGCTTCAAGAAAGCAAGAAATGCACCAACTATGGACCACTTGTTCCCACCTTGTTGCCAAGTCAGGCCTTCCCCCTGAAGTCATCGCCAAGCATCTCCCCATGGATGTCGTCGCCAAGATTGAAGAGCTTCGCTTCAAATCCTCCCTCGCCCGCCGCTCATTAACGCCGCTACACCATCACCACCACCACCATGACACTGCGGCTGAGATTGAGGACCAGAAAATTATGCGAATGAGGCGGGCCCTCGACTCGTCGGATGTGGAACTAGTGAAGCTCATGGTAATGGGGGAAGGACTAAACCTTGATGAAGCATTGGCCTTAAACTATGCGGTGGAGAATTGCAGCAGGGAAGTAGTTAAGGCTTTGCTTGAGCTTGGTGCAGCTGATGTCAACTACCCGGCCAGGCCGTCCGGGAAAACCTCACTCCACGTCGCGGCTGAGATGGTGTCGCCGGACATGGTGGCCGTGTTGCTCGACCACCATGCTGACCCTAATGTTAGAACCGTGGATGGTGTTACTCCTCTTGATATCCTTAGAACCCTAACCTCTGATTTTCTCTTCAAAGGTGCTCTCCCTGGATTAACACACATTGAACCTAACAAGCTTAGGTTGTGTTTGGAGCTTGTTCAATCCGCAGTACTTGTTCTTTCACGTGAAGAAGGAAATGCTAACCCTGCTTCAACTACAGCCATATACCCACCAATGAGTGAAGACACTAATAGCAGTGGCAGCAACAACAACATTGCTAATCTCAACTTGGACTCGAGGTTGGTATATCTTAATCTTGGTGCCACCCATATTGGTGTTGGTAATGATGGTGATAGTAATGATCATAATGATCATAATATGGGTCATGAATCACAAAGTGGTGGATGTGACACAACAATGTATCATCGCCACCACTCTCATGATGACTACTAG 1458 0.4918 MSLEESLRSLSLDYLNLLINGQAFSDITFQVEGHLVHAHRCILAARSLFFRKFFCGADPPSGLDPTEGPSRVNSAGTGTTPRLSGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAASRYFGVEQLALLTQKQLSSMVEKASIDDVMKVLLASRKQEMHQLWTTCSHLVAKSGLPPEVIAKHLPMDVVAKIEELRFKSSLARRSLTPLHHHHHHHDTAAEIEDQKIMRMRRALDSSDVELVKLMVMGEGLNLDEALALNYAVENCSREVVKALLELGAADVNYPARPSGKTSLHVAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGALPGLTHIEPNKLRLCLELVQSAVLVLSREEGNANPASTTAIYPPMSEDTNSSGSNNNIANLNLDSRLVYLNLGATHIGVGNDGDSNDHNDHNMGHESQSGGCDTTMYHRHHSHDDY* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1165 485 Pfam BTB/POZ domain 16 114 IPR000210 GO:0005515
Lan20g1165 485 Gene3D - 245 364 IPR036770 -
Lan20g1165 485 CDD BTB_POZ_NPR_plant 8 166 - -
Lan20g1165 485 SMART BTB_4 25 166 IPR000210 GO:0005515
Lan20g1165 485 SUPERFAMILY Ankyrin repeat 274 359 IPR036770 -
Lan20g1165 485 Pfam Ankyrin repeats (3 copies) 264 346 IPR002110 GO:0005515
Lan20g1165 485 SUPERFAMILY POZ domain 9 195 IPR011333 -
Lan20g1165 485 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 480 IPR044284 GO:0099402
Lan20g1165 485 PANTHER REGULATORY PROTEIN NPR5 1 480 - -
Lan20g1165 485 Pfam Domain of unknown function (DUF3420) 201 258 IPR024228 -
Lan20g1165 485 Gene3D Potassium Channel Kv1.1; Chain A 3 199 IPR011333 -
Lan20g1165 485 ProSiteProfiles Ankyrin repeat region circular profile. 316 346 - -
Lan20g1165 485 ProSiteProfiles BTB domain profile. 25 113 IPR000210 GO:0005515
Lan20g1165 485 SMART ANK_2a 316 345 IPR002110 GO:0005515
Lan20g1165 485 SMART ANK_2a 281 311 IPR002110 GO:0005515
Lan20g1165 485 ProSiteProfiles Ankyrin repeat profile. 316 348 IPR002110 GO:0005515
Lan20g1165 485 MobiDBLite consensus disorder prediction 450 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1165 Lan-Chr20 16214429 16217616 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lan20g1165 BTB 5.8e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1165 K14508 - zju:107433767 766.918