Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1159 ATGAAGGTTATCGCTGCTTATTTGCTAGCTGTGCTTGGAGGCAACAAAACCCCATCACAAAAAGACATAAAAAACATCCTTGCATCTGTTGGAGCTGAAGCTGATGAGGATAAGATTGAGCTGCTTTTAGCTGAAGTTAAGGGTAAGGATATAGAAGATATTATTGCTTCCGGTAGGGAAAAGTTAGCCTCAGTGCCTTCTGGTGGTGGTGCTGTTGCGGTTGCTGCTGCTCCTGGTGGAGGTGCTTCTGCTGCTGCTCCAGCAGCTGCTGAGTCAAAGAAGGAGGAGAAGGTCGTGGAGAAAGAGGAATCTGATGACGATATGGGCTTCAGTCTCTTCGATTAA 345 0.4667 MKVIAAYLLAVLGGNKTPSQKDIKNILASVGAEADEDKIELLLAEVKGKDIEDIIASGREKLASVPSGGGAVAVAAAPGGGASAAAPAAAESKKEEKVVEKEESDDDMGFSLFD* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1159 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lan20g1159 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 114 - -
Lan20g1159 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lan20g1159 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lan20g1159 114 Pfam 60s Acidic ribosomal protein 18 113 - -
Lan20g1159 114 MobiDBLite consensus disorder prediction 81 114 - -
Lan20g1159 114 MobiDBLite consensus disorder prediction 90 108 - -
Lan20g1159 114 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1159 Lan-Chr20 15873438 15875313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1159 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 62.281 4.65e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1159 K02943 - ming:122081114 120.553