Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1154 ATGGCAAAGAAACTCTCAAAAGTAGCTTTCGATGCAAAGTTAGGGAAACTTCTGAAAGAATACAGTCGAGTACTTGTTATTTCATCAGACAACATTGGATGCAATGAACTTCAAGGAATTCGAAGGAATCTCCACGCTGATTCTGTTGTTGTTATGGGGAAAAACTCTATGATGAAACGTTCTTTGATCTTAGATGCTCAAAGAACTGGGAATAAAGCTTTTCTTAACCTTGCACCCCTTCTTCATGGTAATTTGGCTTTGATTTTCACTAAAAGTGACTTGAGGGAGGTTAGCGAACAGGTTGCTAAATACAAGGTGGTTGATCCTATTCTCATGTGCCCTAAGTTCATGTCATATGATTCATACCAGAACTGTTCCTATATGCAATCTGGACAGTTACCTTTGAACCTTAAGTGTTGTAAAGAGCAGTCTTCAGAGAGTTCTGAGCCTTTTCTTGTAAGCTCCAAATTCTCGCCACACCAACATTGTTTCTTGATGAGATCAAGACAGTTTTTGATGACAAGTATATGGGCACCTCTTCTCCTTTTGGCTGGTAACTTGTAA 564 0.3901 MAKKLSKVAFDAKLGKLLKEYSRVLVISSDNIGCNELQGIRRNLHADSVVVMGKNSMMKRSLILDAQRTGNKAFLNLAPLLHGNLALIFTKSDLREVSEQVAKYKVVDPILMCPKFMSYDSYQNCSYMQSGQLPLNLKCCKEQSSESSEPFLVSSKFSPHQHCFLMRSRQFLMTSIWAPLLLLAGNL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1154 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 186 - -
Lan20g1154 187 Gene3D - 2 125 IPR043141 -
Lan20g1154 187 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 186 - -
Lan20g1154 187 Pfam Ribosomal protein L10 4 104 IPR001790 -
Lan20g1154 187 SUPERFAMILY Ribosomal protein L10-like 6 104 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1154 Lan-Chr20 15744883 15749192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1154 3 109 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 59.813 8.84e-41 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1154 K02941 - mnt:21409050 140.969