Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1152 ATGGAAATGCCTTCTAGAAGATCCAACTATTCTCTCCTAAGTCAAACTCCCGATGAACAATTCAGCGCCGGCGCCGCCTCTTCCGGGAATACCGCACCGTCATCCTCCGGCGATTTAAAAACCAACCGATCCATGTTCGATTTCGACATAGTCTCCGATCACAGAGCAGCGCAACAGCAAGGGAACAACCGGACCGGGAATCTGTTCACCTCGATCGGACTGCAGAGACAATCAAGCGGAAGCAGTTTCGGCGAAAGCTCCATCTCCGGCGGTTACGATTATGCTCCGACGCTGTCAACGGCGGCGTTTGGCGACGTGGATACGTTTGGTTACGTTCACGACGATGGACACATGATTGGTGTTGGAGGTGAGGGGAGGAATAGGTTACCGGATACTCCGGCCATCGCCGGAGGGTTTTCCGGGAAGAGCTGGGCGCAGCAAACGGAGGAGAGTTACCATTTGCAGCTAGCTCTGGTGCTTCGGCTTTCCTCGAGTGCGACATGTGCGGATGATCCTAATTTCCTTGATTCAGGGATGGATGAATCCGCCATGGGGTGGTCGAGGTTAGCTGAGACGGTGTCACATAGATTCTGGGTGCATGGCTGCCTATCATACTCCGACAAAGTTCCTGATGGATTTTACCTCATTCGTGGGATAGATTCCTTTGTTTGGACTGTGTGCACTGATCTGCAGGAAAATGGCCGAATTCCAACTATTGATAAACTAAAGTCTGTGGATCCCTGCACCAATTCTTCACTTGAAGTAGTTTTGGTGGACCGACGTAGTGACCCCAGCTTAAAAGAACTTGAAAACAGAGTACATAACATTTCTAGTAGCAGCATAACAACAACAGAGGTTGTAGATCAGCTGTCCAAGCTGGTTTGCAACCATATGGGGGGTTCAACTTCTTTTGGGGAAGATGACTTTGTTTCCATCTGGAGAGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTGTTCCCATAGGTAGTCTGTCTGTTGGCCTCTGCAGGCATCGTGCTATTTTATTCAAAGTACTGGCTGATGCCATTGATTTACCCTGCCGAATTGCAAAGGGTTGTAAATATTGCAAAAGGGATGATGCTGCATCTTGTCTTGTCTGGTTTCAGCATGTAGATGACAGGGAATATCTTGTTGACTTAATAGAGAAGCCAGGTTACTTATCTGAGCCCAATTCACTTCTCAACGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCACTTTCCAAGAGTTAAACCAGCTGAACCTACCATTGATTTCAGATCATTGGCCAAACAGTATTTCTCGGACTGTTTGTGTCTTGAGCTTGTCTTTGATAACAGTTCTGCAGATCAAGATTCTGAAACAATGGTTGCCAAGGACCCACAGCCTATAAAGCATAAGCGTCCTGGTGGTATAAAACCCCCATTAGCACTAACTAATCCCAGTAATGACATTATTGAGGAAAAGAGGTCTTTAGAAGGAAGTCAACTTATTCCTAGCAAACCTACTCGAGAGCTTGCCCTTGACATGGAGGATTTGGATATATCATGGAGCGATCTTGCTTTAAAAGAAAGAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGACTCGGAGGTTGCTGTGAAAATTTTGATGGAACAAGATTTTCATGCTGAACGGGTCAATGAATTCTTAAGGGAGGTTGCAATAATGAAAAGCTTGCGGCATCCAAACATCGTTCTATTGATGGGGGCAGTCACTCAGCCTCCGAACTTATCAATTGTCACTGAATATTTATCAAGGGGTAGCTTATATAGGCTGTTGCATAGACCTGGTGCCAAAGAGGCATTGGATGAGAGGCGTAGGCTTTGTATGGCTTATGATGTGGCAAAAGGGATGAATTATCTTCATAAACGTAATCCCCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGATAAGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGTCTAAAGGCCAATACATTTCTCTCATCCAAGTCAGCTGCTGGAACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGACGAGCCATCAAATGAGAAGTCAGATGTTTACAGTTTTGGTGTTATCTTGTGGGAGATTGCAACATTGCAACAGCCATGGGGCAATTTGAATCCAGCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGAAAAAGGCTTGAGATCCCACATGATTTGAATCCCCATATAGCTGCATTAATTGAAGTTTGCTGGGTCAATGAGCCCTGGAAACGCCCTTCTTTTTCTAGTATTATGGATTCTCTGAGGCCATTGATCAAACAGCCTACGACTCAACCCGGTCATTCAAACATGCCGTTACTTAGCTGA 2397 0.4552 MEMPSRRSNYSLLSQTPDEQFSAGAASSGNTAPSSSGDLKTNRSMFDFDIVSDHRAAQQQGNNRTGNLFTSIGLQRQSSGSSFGESSISGGYDYAPTLSTAAFGDVDTFGYVHDDGHMIGVGGEGRNRLPDTPAIAGGFSGKSWAQQTEESYHLQLALVLRLSSSATCADDPNFLDSGMDESAMGWSRLAETVSHRFWVHGCLSYSDKVPDGFYLIRGIDSFVWTVCTDLQENGRIPTIDKLKSVDPCTNSSLEVVLVDRRSDPSLKELENRVHNISSSSITTTEVVDQLSKLVCNHMGGSTSFGEDDFVSIWRDCSNDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDAASCLVWFQHVDDREYLVDLIEKPGYLSEPNSLLNGPSSISFSSPLHFPRVKPAEPTIDFRSLAKQYFSDCLCLELVFDNSSADQDSETMVAKDPQPIKHKRPGGIKPPLALTNPSNDIIEEKRSLEGSQLIPSKPTRELALDMEDLDISWSDLALKERIGSGSFGTVHRAEWNDSEVAVKILMEQDFHAERVNEFLREVAIMKSLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAKEALDERRRLCMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEIATLQQPWGNLNPAQVVAAVGFKGKRLEIPHDLNPHIAALIEVCWVNEPWKRPSFSSIMDSLRPLIKQPTTQPGHSNMPLLS* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1152 798 Gene3D Phosphorylase Kinase; domain 1 517 602 - -
Lan20g1152 798 MobiDBLite consensus disorder prediction 457 482 - -
Lan20g1152 798 CDD STKc_MAP3K-like 530 778 - -
Lan20g1152 798 SMART serkin_6 524 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1152 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Lan20g1152 798 ProSiteProfiles Protein kinase domain profile. 524 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1152 798 MobiDBLite consensus disorder prediction 1 40 - -
Lan20g1152 798 ProSitePatterns Protein kinases ATP-binding region signature. 530 551 IPR017441 GO:0005524
Lan20g1152 798 Pfam Protein tyrosine and serine/threonine kinase 525 778 IPR001245 GO:0004672|GO:0006468
Lan20g1152 798 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 109 790 - -
Lan20g1152 798 SUPERFAMILY Protein kinase-like (PK-like) 502 777 IPR011009 -
Lan20g1152 798 PANTHER BNAA03G01030D PROTEIN 109 790 IPR028324 GO:0004672
Lan20g1152 798 Pfam Ethylene-responsive protein kinase Le-CTR1 190 397 - -
Lan20g1152 798 Gene3D Transferase(Phosphotransferase) domain 1 603 792 - -
Lan20g1152 798 MobiDBLite consensus disorder prediction 7 40 - -
Lan20g1152 798 PRINTS Tyrosine kinase catalytic domain signature 598 611 IPR001245 GO:0004672|GO:0006468
Lan20g1152 798 PRINTS Tyrosine kinase catalytic domain signature 639 657 IPR001245 GO:0004672|GO:0006468
Lan20g1152 798 PRINTS Tyrosine kinase catalytic domain signature 686 696 IPR001245 GO:0004672|GO:0006468
Lan20g1152 798 PRINTS Tyrosine kinase catalytic domain signature 705 727 IPR001245 GO:0004672|GO:0006468
Lan20g1152 798 PRINTS Tyrosine kinase catalytic domain signature 749 771 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1152 Lan-Chr20 15714457 15726387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1152 1 794 MAP Kinase Kinase Kinase AT5G03730 65.621 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan20g1152 PK_Tyr_Ser-Thr 3.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1152 K14510 - gmx:100800648 1192.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0275 5 3783447 3807486 Lan20g1152 20 15714457 15726387 PCT
Lan20g1152 20 15714457 15726387 Lan5g0275 5 3783447 3807486 PCT