Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1145 ATGGAAGAACAAAAGTTGAACCACACTGTTGTTTCTGCAATATCAAACCCATTAACCACCCCATCAATAACAAACATGAACAACAATGGAGAAACAGCAGCAACAACAATAGCAACAGTGCCTCCTCCTCCTCCTTCTGCAGTGGCAGAAATAGCAGCAATGATAGCAGCACAAGGAAACAGTGCTGATTTGGTGGGTAAGAAGAAAAGAGGGAGGCCAAGAAAATATGACTCAGATGGGAAATTGAATGAGAAGTATCAAAATCCAAAAGCACCACCAGGTTTTACTTTGTCTCCAACTGAACCAAAAAAGGGTTCTGGCAAATCAAATGGCTCCAACAATTGGCAACAACTTTCTGCTTCTTTTGGTGAGGCTTTTGCAAACTCTGCTGGTGGAGATTTTACACCACATGTGGTGACTGTTTATACAGGAGAGGATGTTTCTGGAAAGATCATGTCATTTGCCCAGAAGAGTCCAGGAGGAATATGCATTCTTTCTGCTAATGGACCTGTCTCTAATGTTGCCATACGACAATCCGGTTCTTCTGGAGGCATGTTGACTTACGAGGGTCGATTTGAGATTTTATCTTTGTCCGGATCATTCACAGTTTCCGAAAATAGTGACATAAGAAGTCAAAGTGGTGGATTGAGTGTCTCACTAGCTGGCCCTGATGGCCGTGTGATAGGAGGCGCTGTTGCTGGTCTATTGACAGCTGCTGGCCCCATCCAAATTGTAATGGGAAGCTTCATACCAAATGGTTCCAAGACTCATAAAAAGAAGCAAAACCGCAAACATTCGGTAGCCTCTCCTATTTCAGGTGGTCCAGATATAGTGGCAGCAGCAAGACCTTTCTCACAAGAAAATCCTAATGTTGATGGTGATAACTTCCATTTAGTCATGTCTCAGTTACAAGAACAAAGCAACATAGAATCTGTTAGTGTTACAACAAGTGGTGATACACAGAACATTGATGCCACACCTAATGCTGCTGCTACTTGGAATGGTTCTAATGAATTATCAGATCAGAGGATATCCCCAGACATCAATGTATCTTTGCTAGATGAATAG 1068 0.4242 MEEQKLNHTVVSAISNPLTTPSITNMNNNGETAATTIATVPPPPPSAVAEIAAMIAAQGNSADLVGKKKRGRPRKYDSDGKLNEKYQNPKAPPGFTLSPTEPKKGSGKSNGSNNWQQLSASFGEAFANSAGGDFTPHVVTVYTGEDVSGKIMSFAQKSPGGICILSANGPVSNVAIRQSGSSGGMLTYEGRFEILSLSGSFTVSENSDIRSQSGGLSVSLAGPDGRVIGGAVAGLLTAAGPIQIVMGSFIPNGSKTHKKKQNRKHSVASPISGGPDIVAAARPFSQENPNVDGDNFHLVMSQLQEQSNIESVSVTTSGDTQNIDATPNAAATWNGSNELSDQRISPDINVSLLDE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1145 355 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 28 352 - -
Lan20g1145 355 MobiDBLite consensus disorder prediction 63 115 - -
Lan20g1145 355 MobiDBLite consensus disorder prediction 65 84 - -
Lan20g1145 355 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 249 IPR005175 -
Lan20g1145 355 CDD DUF296 135 249 IPR005175 -
Lan20g1145 355 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 253 - -
Lan20g1145 355 MobiDBLite consensus disorder prediction 316 342 - -
Lan20g1145 355 ProSiteProfiles PPC domain profile profile. 131 271 IPR005175 -
Lan20g1145 355 Gene3D - 136 267 - -
Lan20g1145 355 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 352 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1145 Lan-Chr20 15447577 15451804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1145 39 276 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 45.385 5.36e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1145 - - lang:109335220 673.7