Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1136 ATGGCTCAAGCGACAGGGCGGAGCAGGGTGGTCGGAGACTATATAATAGGGCGGCAAATCGGAGCGGGTTCTTTCTCGGTGGTGTGGCACGGAAGGCACAAGGTGCATGGAACCGAAGTGGCGATAAAGGAGATTGTTACGCTTCGGCTTAACAAGAAGTTGCAGGAGAGTCTTATGTCTGAGATTTTCATCCTCAAGCAGATTAACCATCCTAACATTATTCGTTTGCACGATATTATTGAGGTTCCTGGTAAGATACATCTTGTGTTAGAATACTGTAAAGGGGGAGATCTCTCTTTGTACATTCAATGCCATGGAAGGGTACCGGAGGCTACTGCAAAGCATTTTATGCAGCAGCTTGCTACTGGTCTAAAAGTTCTTCGGGACAATAACCTTATTCACCGAGATCTGAAACCACAGAACCTTCTACTCACCAGAAATGATGAGAGGTCAGTATTGAAGATCGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAGGGGCCTTGCAGAAACTTTGTGTGGTTCACCTCTCTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTCGGTGCTATCTTATTTCAGCTTGTTACAGGAAGAACACCTTTTACCGGAAACAATCAAATACAGTTACTGCAGAATATTATGAAATCAACAGAGTTGCAGTTTCCTTCTGATAACCGAAGTCTGTGTATTGACTGCAAAGATTTGTGTCAAAAATTGCTACGCCGCAATCCAGTGGAACGTTTAACTTTTGAAGAATTCTTCAACCATCCATTCCTTTCTCATAAGCAACCAGAACGTGAAGAACCATCGAGAAGTTCTTCAAGGCTGTTAGGCGAGTTTTGTTCAACAGAGTCTGACCCTTTACGAAGCACCAAGGAAAATTATCAAGAGGAATGCTTGGCTTTCTTTCTAGATGATGATTCTAGTGGTGCTGAGAGGAGCCCTTCCTTTTCAAGGAAGAAGTCCTCAATGAAGTCTACCTATGGATTTGATCTAAATACAGTACTAGATAAAGTAGAGCCAGCATCTCCTATTTTGAATAACGCAAATTATACTTCGGAATATGGTAGTGTTACACATAGACCTGAAAACACTACAAGAAGATTGGACAACCATAAAATATCAAGAAATCTCCTTGATCCTCCAGAATCTCCAGAACAGAGATTTGCGAGCCCTCATTCAAAAGTCACGGATTCACTAGAGCTTATCGACCAAGATTATGTTCTCGTGTCTGGGCCAGCTATGGATGTTTCAACATCATCGGTGAGTGCTTCAAAGATGAGTCATTCCAAATATAAGCCAGGCAGTATACCCCGAGATCCTTCTAATACAATTACTAGATTAAGTGCTCCTATGCCGATTGTTGGTGTACCTGCCAGTAGCACATACCAAAGTGGAAGTTCAGAAAGTCAGGACTCTGCTCCTGGGACTTCACATGGATCGATTGATACAGGTGATGAACAGCCATCAGCTCACTGCATGACAAGGATAAAATCATTGACACAATGTGCATCTGCCATCACAGAATTAGTTAATGAAAAGATAGAGGCAGGAAAGCAGCTTGAATCATTCTCTATTCAGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTGCATATATGCCATACACAGGCTGCTTCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGGAGGAGCACCAGCAAGAAGCATGGCAGTTCTGATTCAGAAGGATGCCTTCTTGGAAACATCCAAGATTCAAAAGACATATTATCGCAAATTGAGAGTAAATTTCTGAGGGAAATTGAGCATGCTGAAGAGCTTGCCAAGGCCATTGAGCCTGGAAATGCAGAGATGCCAGATGCAATGGAGACAATATTCCAATCTGCCCTTGCTTTTGGGAGACATGGGGGTGTAGAAGAGCTCATGGGTGAAATGGAAAGTGCTGCCACATTTTATTCAAAAGCTGTTCATCTGTTAGTCTTCCTTCTGGTGGAAGCACCATTGTTGATTCTTAATCCTCCATTTTCACTGACAAACTCCGACCGATACAGGATTCAGACTTATATTGATATTCTTAATAACAGGCAAGGTTATTCAAGGTCTCAACTAATGACATTTCTGAAATGTGATGATAGTCAAGGGATCCTTAAGGAAAAGTTCTAG 2193 0.4232 MAQATGRSRVVGDYIIGRQIGAGSFSVVWHGRHKVHGTEVAIKEIVTLRLNKKLQESLMSEIFILKQINHPNIIRLHDIIEVPGKIHLVLEYCKGGDLSLYIQCHGRVPEATAKHFMQQLATGLKVLRDNNLIHRDLKPQNLLLTRNDERSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELQFPSDNRSLCIDCKDLCQKLLRRNPVERLTFEEFFNHPFLSHKQPEREEPSRSSSRLLGEFCSTESDPLRSTKENYQEECLAFFLDDDSSGAERSPSFSRKKSSMKSTYGFDLNTVLDKVEPASPILNNANYTSEYGSVTHRPENTTRRLDNHKISRNLLDPPESPEQRFASPHSKVTDSLELIDQDYVLVSGPAMDVSTSSVSASKMSHSKYKPGSIPRDPSNTITRLSAPMPIVGVPASSTYQSGSSESQDSAPGTSHGSIDTGDEQPSAHCMTRIKSLTQCASAITELVNEKIEAGKQLESFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRRSTSKKHGSSDSEGCLLGNIQDSKDILSQIESKFLREIEHAEELAKAIEPGNAEMPDAMETIFQSALAFGRHGGVEELMGEMESAATFYSKAVHLLVFLLVEAPLLILNPPFSLTNSDRYRIQTYIDILNNRQGYSRSQLMTFLKCDDSQGILKEKF* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1136 730 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1136 730 CDD STKc_ATG1_ULK_like 20 270 - -
Lan20g1136 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Lan20g1136 730 MobiDBLite consensus disorder prediction 470 497 - -
Lan20g1136 730 MobiDBLite consensus disorder prediction 558 587 - -
Lan20g1136 730 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1136 730 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 704 IPR045269 GO:0004674|GO:0006914
Lan20g1136 730 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1136 730 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 1 704 - -
Lan20g1136 730 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Lan20g1136 730 MobiDBLite consensus disorder prediction 433 501 - -
Lan20g1136 730 Gene3D Transferase(Phosphotransferase) domain 1 5 336 - -
Lan20g1136 730 MobiDBLite consensus disorder prediction 387 408 - -
Lan20g1136 730 SUPERFAMILY Protein kinase-like (PK-like) 9 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1136 Lan-Chr20 15091540 15099339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1136 10 271 CBL-interacting serine-threonine protein kinases AT2G30360 37.313 3.22e-53 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lan20g1136 Pkinase 3.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1136 K08269 - gmx:100791596 1195.65