Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1133 ATGAAGATACTACAAAATTTGTCATTACTACTTGCCTTCTGTCTCTATTGTTTGCCTATAGTGATACAAGGATCAGATCAAAATGAAAGAAAGCCTTACATTGTTTACATGGGAGAAATCCCAATGGGTAGAACCTATGCCATAAAAGAGCACCACCTCAACTTGCTGGAAGCTGTGACGGGAAGCCAACAGATAGCCAAACAAATCAGAATACATAGCTATGGGAAGAGCTTCAATGGATTCGTTGCCCGTCTTTTGCCACGTGAAGCAAAGAGATTACTAGGAGAGGAAAATGTGATATCTGTGTTTCCAAATACACATAATAAATTACACACAACAAGGTCATGGGATTATCTGGGAATGCCCTTAAATGTGAACAGACGCCTCAATATAGAGAGCAATATCATTGTTGGTCTCTTAGACACAGGAATTTCGCTCGATTGCCCAAGTTTTAATGATAAGGGTTTTGGGCCTCCACCACCTAGATGGAAGGGTAAATGTGTTACTACTGCAAATTTCACTGGCTGCAACAACAAGGTGATTGGAGCAAAATACTTCTACCTAGAACAACCTGTCATAGAGAATGCCAGCCCTATGGACGAAGACGGCCATGGCACTCACACATCCTCCACGGCTGCAGGCGTGCCAGTGGCAGGTGCTAGTGTTGATGGCATAGGCCGAGGCACGGCGCGTGGCGGAGTCCCATCCGCCCGCATAGCTATGTACAAGGTCTGCTGGGAGTCAGGATGTAGTGACATGGACATGTTGGCTGCTTTTGACGAGGCCATAGCTGATGGTGTCAACTTGATATCAGTGTCTATAGGGGGCCCACCTAGGGACTTTTTCAGTGACCCTATTGCTATTGGATCATTTCATGCTATGAGGAGAGGGATTCTTACTTCTTGTTCAGCTGGGAATGATGGTCCTGATCTTAAAAGTGTTGAAAATGTGGCTCCTTGGATTATGACTGTGGCAGCTTCTTCCATGGATAGAGAGTTCACAACAATGGTAGCCTTAGGTGATGGCAAGAATGCTACTGGAATATCTATTAATACCTTTACCCCTGAGAACAAAATGTACCCATTGACTAGTGGAGCCCTTGCTGCTAATCATAGCAGAGATGACTATGGCAATGCAAGTTCTTGTGATCCTGATACTTTGAGCAAGGAAAAGGTGATGGGCAGGATTGTGTACTGCCTTGGGCAAGGCAACCAGGACTGGAACATCAAAGAATTAGGCGGAGCAGGGACCATTGTTGCCCTTGATGAGAGAGCCGATTACGGCTCCATCACAATTATTCCAGGGTCCTATGTTGATGCCAATAATGTAGGCAAACAGATTGAGCTCTACATCAACTCCACCAAGGATCCTGTAGCTATTATATACAAGTCAATAAGTACAAGAGTCCCTGCTCCACGTATTATTTCTTTCTCATCCAGAGGTCCTCAATCGATCGCCAACAACATCCTAAAGCCTGATTTGGCTGCTCCTGGAGCAAACATTCTAGCTGGTTATTCTAAACTGCCAAGTCTAACCGGAAATCCTGAAGACACTCGTCACAATGTTTTTAATATCTTATCAGGAACATCCATGGCCTGTCCACATGCTACAGCTGCTGCCGCCTATGTTAAATCCTTCCGCCCTGGATGGAGTCCTGCTGCAATCAAGTCTGCTCTCATGACCACAGCCACTCCAATGAGTATCAAAGACAATTCAGCAGAGCTAGGATCTGGTTCAGGGCAGATAAACCCACTAAGAGCAATACATCCTGGCCTACTTTATGACATGAATATGAACTCCTATATTGCCTATCTATGCAAAGAAGGCTACACCAACACCAACATTGATATACTAATTGGCAGCAAAGGCTTCAATTGCTCCACCATTGCCCCTCCTCCACAAAGCACTGATGGAATCAACTACCCTTCAATGCATCTCCGGATCTTATCTCCGGATTCCGAAATTTCCGCAATCTTTTATAGGAGTGTGACCAATGTAGGACAGGCAAATTCAACTTACAAGGCTATAGTCACAGCACCTAAGGGTCTTTCCATTGAGGTTGTCCCAGACATATTGCAGTTTAGTAGGGTGCGCCAAGAGCTGTCATTCAAGGTTGTTCTTAAGGGACCTCCAATGCCAATGGAGGTAAACATATTATCAGCATCAATTGAATGGAATGACTCTAGACACAGTGTTAGAAGTCCTATTCTTGTTTATAATTGA 2223 0.4453 MKILQNLSLLLAFCLYCLPIVIQGSDQNERKPYIVYMGEIPMGRTYAIKEHHLNLLEAVTGSQQIAKQIRIHSYGKSFNGFVARLLPREAKRLLGEENVISVFPNTHNKLHTTRSWDYLGMPLNVNRRLNIESNIIVGLLDTGISLDCPSFNDKGFGPPPPRWKGKCVTTANFTGCNNKVIGAKYFYLEQPVIENASPMDEDGHGTHTSSTAAGVPVAGASVDGIGRGTARGGVPSARIAMYKVCWESGCSDMDMLAAFDEAIADGVNLISVSIGGPPRDFFSDPIAIGSFHAMRRGILTSCSAGNDGPDLKSVENVAPWIMTVAASSMDREFTTMVALGDGKNATGISINTFTPENKMYPLTSGALAANHSRDDYGNASSCDPDTLSKEKVMGRIVYCLGQGNQDWNIKELGGAGTIVALDERADYGSITIIPGSYVDANNVGKQIELYINSTKDPVAIIYKSISTRVPAPRIISFSSRGPQSIANNILKPDLAAPGANILAGYSKLPSLTGNPEDTRHNVFNILSGTSMACPHATAAAAYVKSFRPGWSPAAIKSALMTTATPMSIKDNSAELGSGSGQINPLRAIHPGLLYDMNMNSYIAYLCKEGYTNTNIDILIGSKGFNCSTIAPPPQSTDGINYPSMHLRILSPDSEISAIFYRSVTNVGQANSTYKAIVTAPKGLSIEVVPDILQFSRVRQELSFKVVLKGPPMPMEVNILSASIEWNDSRHSVRSPILVYN* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1133 740 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 111 IPR037045 -
Lan20g1133 740 CDD PA_subtilisin_like 339 461 - -
Lan20g1133 740 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Lan20g1133 740 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Lan20g1133 740 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Lan20g1133 740 CDD Peptidases_S8_3 109 564 IPR034197 -
Lan20g1133 740 Gene3D - 330 467 - -
Lan20g1133 740 PANTHER CUCUMISIN PROTEIN 22 739 - -
Lan20g1133 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 739 IPR045051 -
Lan20g1133 740 Gene3D Peptidase S8/S53 domain 134 601 IPR036852 GO:0004252|GO:0006508
Lan20g1133 740 SUPERFAMILY Subtilisin-like 110 592 IPR036852 GO:0004252|GO:0006508
Lan20g1133 740 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Lan20g1133 740 Pfam Fibronectin type-III domain 639 738 IPR041469 -
Lan20g1133 740 ProSiteProfiles Serine proteases, subtilase domain profile. 115 588 - -
Lan20g1133 740 Pfam Subtilase family 133 571 IPR000209 GO:0006508|GO:0008236
Lan20g1133 740 Gene3D - 605 740 - -
Lan20g1133 740 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1133 Lan-Chr20 14898197 14904290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1133 9 562 Subtilisin-like Serine Gene Family AT5G03620 60.847 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1133 - - gmx:100816428 1092.8