Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1129 ATGGCGGAAGAACATCGATGCGAAGCTCCCGAAGGACACAGACTCTGCACAAATAACTGCGGATTCATCGGAAGCCCAACCACCATGAATCTCTGTTCCAAATGCTACAGAGATATCCGTTTAAAGCTACAAGAAGAAGCTTCAACCAAATCCACAATCGAAACCGCTCTCTCCTCCACCACCTCTTCTCCGCCGTCTCCGGCCGTCGTGTCCATCCCTCGTATATCAAGCTCAACCGTAACCGTAACCAAAGACGCTGTTGCTTCCGAATTAATATCTGAAGCGGTTCAACCGAACCGGTGCGGTTCGTGCAGGAAGCGGGTCGGTTTAACCGGGTTCAAGTGCAGGTGTGGGGTCACGTTTTGCGGGACCCACAGGTACCCGGAGAAACACGTGTGCAGCTTCGATTTCAAAACGGTGGGGAGAGAGGAAATTGCTAAAGCGAATCCTGTGATCAAAGCGACCAAGCTGGAGAGGATTTGA 483 0.5155 MAEEHRCEAPEGHRLCTNNCGFIGSPTTMNLCSKCYRDIRLKLQEEASTKSTIETALSSTTSSPPSPAVVSIPRISSSTVTVTKDAVASELISEAVQPNRCGSCRKRVGLTGFKCRCGVTFCGTHRYPEKHVCSFDFKTVGREEIAKANPVIKATKLERI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1129 160 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Lan20g1129 160 Gene3D - 1 65 - -
Lan20g1129 160 Gene3D - 75 156 IPR035896 -
Lan20g1129 160 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Lan20g1129 160 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 160 - -
Lan20g1129 160 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Lan20g1129 160 ProSiteProfiles Zinc finger AN1-type profile. 95 141 IPR000058 GO:0008270
Lan20g1129 160 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 160 - -
Lan20g1129 160 SMART AN1_Zf_4 101 138 IPR000058 GO:0008270
Lan20g1129 160 SUPERFAMILY AN1-like Zinc finger 90 154 IPR035896 -
Lan20g1129 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 59 - -
Lan20g1129 160 Pfam AN1-like Zinc finger 101 137 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1129 Lan-Chr20 14812723 14813787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1129 1 160 C2H2 Transcription Factor Family AT3G52800 55.294 4.62e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1129 - - lang:109347531 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0286 5 4022449 4023267 Lan20g1129 20 14812723 14813787 PCT