Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1120 ATGTCCTCCTCCATCCTTCTAAACCCACACTCTCCCTTCCCCTCCCCATTCCAACACCACCACCTTCTAAAACTAAGACCAACAACAATACCCTCTTTCACTCCACTCACCCCAACAAAACACCCTTCTTTTAAAGCCTCCTTCAAAATCCATAACAAAAACAACAACAACAACAATAGTAACAATAACTCCACAACTTCCCAAACCCATTCCTTACCCAACACTTTCCAATTCCTCAAACCTTACCTTCTCTCACACCACAAACCCATCCTCTCCGCCTGGCTATGCTCCGCCCTCTCAGTCTACTCCCTCTCTAAACTAATCGCCATATTCTCCACCATCACCACCACCGCCGCCATCGATGCCGCCCAATTGCCCATATTGGGGTGTTTGGTGGCCACCCGGCTGGTAACCAACTACTGCCAGCATGCCCTTCTGTGGGACGCTGCCCTGAAAGCAGTGTATGAGCTTCGGGTACATGTCTTTGAGCGTGTTTTGGAGAGGGAGTTAGGGTATTTCGAATCTAAGGATGGTGTTTCAAGTGGGGATATTGCGTATCGAATCACTTCTGAAGCTTCTGATGTTGCTGATAATTTATATGCTGTTCTCAATACTATAGTACCCAGTACTCTGCAGTTATTTGCGATGATGGCTCAGATGCTAATTATAAGTCCTGTCCTTTCTTTGATTTCAGCCATGGTTATTCCATGCATGGCACTTGTTGTTGCCTTTCTTGGTCAAGAACTTCGTAAGATATCTAAAGAGGCACATCTTAGCATTGCTGCTCTGTCAGCATATCTAAATGAGATTCTGCCGGCGGTTCTCTTTGTGAAATCAAACAACGGTGAGTTGTGTGAGAGGGCCAGGTTTAAATGGCTTGCTCATATTGACTATTCTGCAAAGCTGGACAAGAAAAGGATGAAGGCAGTCATTCCTCAGGTCATACAAGCTATTTATTTTGGAATCCTTTCCATACTTTGTGCTGGCTCAGTGATGATCTCAAGAGGTTCATTTGGTGGCTCTCGCTTGGTTTCATTCGTGACGTCATTGGTTTTCTTGATGGAGCCAATCCAGGATGTGGGAAAAGCTTATAATGAATGGAGGCAGGGAGAACCAGCTGTTGAACGCTTGTTTGCTATGACCAGGTTCCAAGATAAGGTGGTTGAGAAGCCAGAGGCTGTTGATTTAGACTATGTTAATGGAGAGCTTAAGTTTTGTGATGTCTCATTTAACTATAATGATGACATGCCACATGTTTTAAATGGGTTGAATCTTCACATTAGAGCTGGAGAGATAGCTGCTCTTGTGGGTCCTTCTGGTGGAGGGAAAACGACGATTAGCAAATTGTTGCTTCGGCTTTATGATCCTATATCTGGCTGCATAGTGGTTGATAACCATAACATCCAAAACATTCGGTTGCAAAGTTTGAGAAGGCATGTTGGTCTTGTTTCTCAAGATATAACACTTTTTTCAGGTACAGTTGCTGAAAACATTGGTTATAGGGATCTGATGACAAAAATTGACATGGAGAGGGTCAAGCATGTAGCTGAAACTGCTCATGCAGATGAGTTCATTAGAAAACTTCCAGAAGGATACAAAACCAATATTGGACCAAGGGGCTCAACTTTAAGCGGAGGCCAAAGGCAAAGGTTGGCTATTGCAAGGGCACTCTATCAAAATCCTTCTATATTAATACTGGATGAGGCAACGTCTGCTTTAGATAGTAAATCCGAGTTATTGGTGAAACAGGCTGTACAGCGTTTAATGGAAAATCGGACTGTGCTTGTGATCTCCCATCGCTTGGAAACAGTTTTGATGGCTGAAAGAATATTCCTTTTGGATAATGGGAAACTAGAAGAGCTCCCTCGTTCAACTATGTTTGATAATCACAAGGATTCATTGCTATCATCTGGCCTTCTAATTTGA 1926 0.4335 MSSSILLNPHSPFPSPFQHHHLLKLRPTTIPSFTPLTPTKHPSFKASFKIHNKNNNNNNSNNNSTTSQTHSLPNTFQFLKPYLLSHHKPILSAWLCSALSVYSLSKLIAIFSTITTTAAIDAAQLPILGCLVATRLVTNYCQHALLWDAALKAVYELRVHVFERVLERELGYFESKDGVSSGDIAYRITSEASDVADNLYAVLNTIVPSTLQLFAMMAQMLIISPVLSLISAMVIPCMALVVAFLGQELRKISKEAHLSIAALSAYLNEILPAVLFVKSNNGELCERARFKWLAHIDYSAKLDKKRMKAVIPQVIQAIYFGILSILCAGSVMISRGSFGGSRLVSFVTSLVFLMEPIQDVGKAYNEWRQGEPAVERLFAMTRFQDKVVEKPEAVDLDYVNGELKFCDVSFNYNDDMPHVLNGLNLHIRAGEIAALVGPSGGGKTTISKLLLRLYDPISGCIVVDNHNIQNIRLQSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVKHVAETAHADEFIRKLPEGYKTNIGPRGSTLSGGQRQRLAIARALYQNPSILILDEATSALDSKSELLVKQAVQRLMENRTVLVISHRLETVLMAERIFLLDNGKLEELPRSTMFDNHKDSLLSSGLLI* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1120 641 CDD ABC_6TM_exporters 127 377 - -
Lan20g1120 641 ProSitePatterns ABC transporters family signature. 543 557 IPR017871 GO:0005524
Lan20g1120 641 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 95 369 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan20g1120 641 Pfam ABC transporter transmembrane region 100 356 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan20g1120 641 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 39 631 IPR039421 -
Lan20g1120 641 Gene3D - 393 636 IPR027417 -
Lan20g1120 641 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 640 IPR003439 GO:0005524
Lan20g1120 641 Pfam ABC transporter 420 571 IPR003439 GO:0005524
Lan20g1120 641 SUPERFAMILY ABC transporter transmembrane region 79 382 IPR036640 GO:0005524|GO:0016021
Lan20g1120 641 MobiDBLite consensus disorder prediction 49 69 - -
Lan20g1120 641 PANTHER ABC TRANSPORTER B FAMILY MEMBER 29, CHLOROPLASTIC 39 631 - -
Lan20g1120 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 621 IPR027417 -
Lan20g1120 641 Gene3D ABC transporter type 1, transmembrane domain 51 384 IPR036640 GO:0005524|GO:0016021
Lan20g1120 641 SMART AAA_5 429 617 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1120 Lan-Chr20 14447941 14453925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1120 146 638 Calmodulin-binding Proteins AT2G36910 30.409 1.03e-57 209