Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1087 ATGGCTATCTCAATGTTAATGTCCAGACTAACACAACCCTTAATAAATGTCCCTTCCAGTGGCCAAAAATTGAACATGAGACAGATTCAAAAGGAGAAGGTAGTGCTAGTGATGGGAGCAACAGGCACGGGAAAATCAAGGCTCTCAATCGACCTAGCCACATGTTTTCCCTCAGAAATCATCAATTCTGATAAAATGCAAGTCTATGAAGGACTTGACATAGTTACAAACAAAATCTCTAAGGAAGAACAACATGGGGTGCCACACCATTTACTAGGAACACATAACACCAACAAAGAGTTCACTGCCACTGATTTTTGTGACATATCATTAGCTTCCATTGACTCTATCACAAGCCGTGAGAAGCTTCCAATCATCGTTGGAGGCTCCAACTCATATCTTGAGGCATTGATCGATGCTGATGACTATAAGTTTCGATCAAGGTATGATTTTTGTTGTCTTTGGGTGGATGTGTCAATAGATACTCTTCATTCTTATGTTTCAGAACGAGTTAATCAAATGTTTGAGTATGGAATGGTTGATGAACTTAGACCCTTTTTCAATCCTAAAGGAGACTATTCAAGGGGGATTAGAAAAGCTATTGGTGTTCCTGAATTTGATGAATATTTTAGGAGGGAAGCATTTATTGGTGAAGAAACTAAGCAAAGGTTACTTGAAGAAGCAATCAATGAAATGAAGGTGAATACTTGCAAATTGGCTATGAAACAATTAGGGAGGATTCATAGACTCAGAAATGTTAAGAGATGGAAAATTCATAGGTTAGATGCTACTCCTGTGTTTAGAAAGCATGGTCAAGAAGCAAAAAATGATGCATGGAAAAAGTTGGTGGCAGAGCCTAGTGCTATGATTGTTGCCAACTTTCTCTACAACTCAAACACCAATAGCACTACCACTAGTACTAAAGGTTTTTCTGGCCATAGAATATTGTCACCTTCTCAGAGTGCTATTGTTGCGGCAACATGCTAG 987 0.388 MAISMLMSRLTQPLINVPSSGQKLNMRQIQKEKVVLVMGATGTGKSRLSIDLATCFPSEIINSDKMQVYEGLDIVTNKISKEEQHGVPHHLLGTHNTNKEFTATDFCDISLASIDSITSREKLPIIVGGSNSYLEALIDADDYKFRSRYDFCCLWVDVSIDTLHSYVSERVNQMFEYGMVDELRPFFNPKGDYSRGIRKAIGVPEFDEYFRREAFIGEETKQRLLEEAINEMKVNTCKLAMKQLGRIHRLRNVKRWKIHRLDATPVFRKHGQEAKNDAWKKLVAEPSAMIVANFLYNSNTNSTTTSTKGFSGHRILSPSQSAIVAATC* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1087 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 258 - -
Lan20g1087 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 302 IPR039657 -
Lan20g1087 328 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 302 - -
Lan20g1087 328 Gene3D - 31 295 IPR027417 -
Lan20g1087 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 142 IPR027417 -
Lan20g1087 328 Pfam IPP transferase 145 244 - -
Lan20g1087 328 Pfam IPP transferase 67 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1087 Lan-Chr20 13164431 13166035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1087 147 316 C2H2 Transcription Factor Family AT2G27760 30.457 2.60e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1087 K10760 - gmx:100803964 466.077