Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan20g1078 | ATGGCCACCATTCCTTCTTCTCATCTCTGTCTCTTCTTCCTTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCATCCTCCTCATCAGAATCCCCACAAAACTTCATCATCCACGTGTCACAATCACAAAAGCCTTCCCTTTTCTCCACCCACCACCACTGGTACTCTTCCATCCTCCGCTCCCTCCCTCCTTCCCCTCACCCTGCCAAGCTCATCTACACCTACTCCTCCGTCATCCACGGCTTCTCCGTCCGCCTCACACCCACCCAAGCTGCCGCTCTCCGCCGCATCCCCACCATCCTCTCCGTCCTCCCTGATCAAATCCGCTACCTCCACACCACCCACACTCCTCGCTTCCTCGGCCTCGCGGAATCCTTCGGCCTGTGGCCCAACTCCGACTTCGCCGACGATGTCATCATCGGCGTTCTTGACACCGGGATCTGGCCTGAGCGCCGGAGCTTCTCGGACGCTGGACTATCACCTGTTCCTTCTTCATGGAAAGGCACGTGTGAGACGTCACGTGACTTCCCTTCTTCTTTATGCAACAAGAAGATTATTGGTGCTAAAGCCTTTTATAAAGGGTATGAATCGTATTTAGGTGGACCAATTGATGAGTCTTTGGAATCTAAGTCCCCTAGAGATACTGAAGGCCATGGAACACACACGGCTTCCACCGCTGCAGGTTCTGTTGTTGCAAATGCTAGCCTGTTCCACTATGCTCAAGGTGAAGCAAGAGGAATGGCTACAAAGGCTAGAATTGCTGCCTATAAGATCTGTTGGAGTCAGGGTTGTTTTGATTCTGATATTCTTGCTGCTATGGATCAAGCTGTAGCTGATGGGGTTCATGTAATTTCTCTTTCTGTTGGATCTTCTGGTTATGCACCACAATATTATCATGATTCCATTGCTATTGGAGCTTTTGGAGCAGCTCAGAATGGTGTTGTTGTCTCTTGTTCTGCTGGGAATTCGGGACCTGGTCCTTATACTGCTGTGAATATTGCTCCTTGGATTTTGACTGTTGGTGCTTCAACTATTGACAGAGAGTTTCCTGCTGACGTGGTTCTAGGAGATGGTAGAGTTTTTAGTGGGGTGTCCCTTTATTCCGGTAAGAATTTGCCTGATTTTAAGCTTCCTTTGGTTTATGCTTCTGATGTCGGAAACAGATATTGTTACTTGGGATCACTGCAGCCAAGTAAAGTTCAAGGGAAAATTGTTGTTTGTGATAGAGGAGGGAATGCTAGGGTTGAAAAAGGCAGTGCAGTGAAGCTTGCAGGTGGGTTGGGATTGATTTTAGCCAATCTCGAAGACAGTGGCGAAGAGCTTCTAGCGGATGCACATCTTCTGGCTGCAACTATGGTGGGCCAAACTGCTGGTGACAAGATCAAGGAGTATATAAGGTTGAGTCAGTATCCAACAGCAACCATAGAGTTTAGAGGGACTGTAATTGGAACTTCACCTTCTGCTCCTAGAGTTGCATCATTTTCTAGCCGCGGTCCAAACCATCTCACACCAGAGATTCTTAAGCCCGACGTTATAGCTCCTGGTGTTAACATCTTGGCAGGGTGGACCGGAAAGGTAGGACCTACAGATTTGGACATTGATCCTAGAAGAGTTGAGTTTAACATAATATCAGGTACTTCAATGTCTTGCCCCCATGTTAGTGGAATTGCAGCATTGCTTAGGAAGGCTTATCCAAAATGGTCACCTGCTGCAATAAAGTCTGCTTTGATAACAACTGCATATAATGTCGATAATTCTGGGAATAATCTTCAGGACCTTGGAACTGGGAAAGAATCAAACCCATTCATTCATGGGGCAGGACATGTTGATCCCAATAGGGCTCTCAATCCTGGGTTGGTTTATGATTTAGACGATAATGACTATTTGGCATTCCTATGCTCGATCGGGTATGATTCTAAGCAAATTGCGGTTTTCAATAAACAGCCTGCTAGTTTGAACATTTGTGAAACAAAACTAGCTAGGACTGGGAGATTAACTAGTCCTGGTAATTTGAATTATCCATCTTTCTCAGTCGAATTTGGCTCCAACAATGACTTGGTTACATATAAACGGGTTGTTACTAATGTGGGAAGCTCAGCAGATGCTGTTTACAATGTCAAAGTGAATGCTCCCGCTGGCGTTGAAGTCAGTGTCTCCCCCAGCAAGCTTGTGTTCAGTGCTGAAAACAAAACACAAGCCTTTGAGGTAACATTTGTTCAAGGAATTGGGAGTGCTAATTCTGCGAGTTTCGGGTCAATTGAGTGGGTTGATGGAAGTCACATTGTGAGGAGCCCAATTGCTGTTAAATGGAGCAATGAATTATCAGCATCCATGTGA | 2334 | 0.4614 | MATIPSSHLCLFFLLSLSLSLSLSSSSSESPQNFIIHVSQSQKPSLFSTHHHWYSSILRSLPPSPHPAKLIYTYSSVIHGFSVRLTPTQAAALRRIPTILSVLPDQIRYLHTTHTPRFLGLAESFGLWPNSDFADDVIIGVLDTGIWPERRSFSDAGLSPVPSSWKGTCETSRDFPSSLCNKKIIGAKAFYKGYESYLGGPIDESLESKSPRDTEGHGTHTASTAAGSVVANASLFHYAQGEARGMATKARIAAYKICWSQGCFDSDILAAMDQAVADGVHVISLSVGSSGYAPQYYHDSIAIGAFGAAQNGVVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFPADVVLGDGRVFSGVSLYSGKNLPDFKLPLVYASDVGNRYCYLGSLQPSKVQGKIVVCDRGGNARVEKGSAVKLAGGLGLILANLEDSGEELLADAHLLAATMVGQTAGDKIKEYIRLSQYPTATIEFRGTVIGTSPSAPRVASFSSRGPNHLTPEILKPDVIAPGVNILAGWTGKVGPTDLDIDPRRVEFNIISGTSMSCPHVSGIAALLRKAYPKWSPAAIKSALITTAYNVDNSGNNLQDLGTGKESNPFIHGAGHVDPNRALNPGLVYDLDDNDYLAFLCSIGYDSKQIAVFNKQPASLNICETKLARTGRLTSPGNLNYPSFSVEFGSNNDLVTYKRVVTNVGSSADAVYNVKVNAPAGVEVSVSPSKLVFSAENKTQAFEVTFVQGIGSANSASFGSIEWVDGSHIVRSPIAVKWSNELSASM* | 778 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan20g1078 | 777 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 544 | 554 | IPR023828 | - | |
| Lan20g1078 | 777 | SUPERFAMILY | Subtilisin-like | 110 | 618 | IPR036852 | GO:0004252|GO:0006508 | |
| Lan20g1078 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 134 | 153 | IPR015500 | - | |
| Lan20g1078 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 213 | 226 | IPR015500 | - | |
| Lan20g1078 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 543 | 559 | IPR015500 | - | |
| Lan20g1078 | 777 | SUPERFAMILY | PA domain | 372 | 462 | IPR046450 | - | |
| Lan20g1078 | 777 | Pfam | Subtilase family | 135 | 588 | IPR000209 | GO:0006508|GO:0008236 | |
| Lan20g1078 | 777 | Gene3D | Peptidase S8/S53 domain | 136 | 627 | IPR036852 | GO:0004252|GO:0006508 | |
| Lan20g1078 | 777 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT1.6 | 22 | 772 | - | - | |
| Lan20g1078 | 777 | Pfam | PA domain | 375 | 460 | IPR003137 | - | |
| Lan20g1078 | 777 | Pfam | Fibronectin type-III domain | 669 | 767 | IPR041469 | - | |
| Lan20g1078 | 777 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 111 | IPR037045 | - | |
| Lan20g1078 | 777 | CDD | PA_subtilisin_like | 351 | 474 | - | - | |
| Lan20g1078 | 777 | Pfam | Peptidase inhibitor I9 | 34 | 111 | IPR010259 | - | |
| Lan20g1078 | 777 | Gene3D | - | 345 | 481 | - | - | |
| Lan20g1078 | 777 | CDD | Peptidases_S8_3 | 109 | 580 | IPR034197 | - | |
| Lan20g1078 | 777 | SUPERFAMILY | Protease propeptides/inhibitors | 31 | 110 | - | - | |
| Lan20g1078 | 777 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 116 | 614 | - | - | |
| Lan20g1078 | 777 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 22 | 772 | IPR045051 | - | |
| Lan20g1078 | 777 | Gene3D | - | 631 | 769 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan20g1078 | Lan-Chr20 | 12661018 | 12664342 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan20g1078 | 11 | 769 | Subtilisin-like Serine Gene Family | AT3G14067 | 66.710 | 0.0 | 1048 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan20g1078 | - | - | gmx:100793990 | 1239.94 |