Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1063 ATGGGTAACAACTGCGTGGGGCCAAACTCCCTCGGTGGGAATGGGTTCCTACAATCTGTTTCGGCTGCAGTGTGGAAAACTCGCCCGCCGGATGCAAGGCTTTTGCCGCCAAACAACGCCACCGACGCAGCTGCAACCACCGACAACAACAATAACAAATCAACAACGTCACCGCCGAAAGATTCCTCCAAAGATTCGTCTATTGGCAAAGGCTCCGACGGTTCCAAAGGCAATAACGATCCTCCCATGCCGGTTCGGAGCACTCCGCCGGAACCGGTTAAAATAGCAGCAGCAGTGGAAACAAAACCGATGCCAGTTCAACCGAAAAAGCCCGTTCAACCGGTGGTAAATAATGGACTAGCACCTGTTAATATCAGCGCTGGACCCGATGGTGGTGGTGGTGGTGATGATGGAAAAGCTAAGAAACCCACCCATGTTAAAAGGCTTTCCAGTATGGGGCTTCAAGTGGAATCTGTGTTGGGTAGGAAAACTGGGAACTTGAAAGATATTTATAGCTTGGGGAGAAAACTAGGGCAAGGGCAATTTGGTACGACATTTTTGTGTGTGGAGAAAGGGACTAATAAAGAGTTTGCATGCAAATCTATTGCCAAGAGGAAACTAACAACACAGGAAGATGTTGAAGATGTTAGGAGGGAGATTCAGATAATGCATCACATGGCTGGTCACCCAAATGTTATACAAATAATTGGTGCTTATGAAGATGCTGTGGCTGTGCATGTTGTTATGCAGCTTTGTGCTGGTGGAGAACTTTTTGATCGGATCATACAGAGAGGACATTATACTGAGAGAAAAGCTGCTGAGCTTGCTAGGTTGATTGTTAGTGTTGTTGAGGCTTGTCATTCTTTAGGTGTCATGCATAGGGACTTGAAGCCTGAGAATTTCCTCTTCATTAACCATGAAGAAGAATCGCCACTTAAGACAATAGATTTTGGTCTCTCAGTATTCTTTAGACCAGGTGAAACATTTACTGATGTGGTTGGGAGCCCATACTATGTTGCACCTGAAGTTTTGCGGAAGCAATATGGTCCAGAATGTGATGTTTGGAGCGCTGGGGTTATCATTTATATTTTACTAAGTGGAGTTCCCCCATTTTGGGATGAAACTGAACAAGGAATATTTGAGCAAGTTTTGAAAGGAGAACTTGACTTTATTTCTGAACCATGGCCTAGTATCTCTGCAAGTGCAAAAGATCTTGTTCGCAGAATGCTTTTAAGGGACCCGAAGAAGCGATTGACAGCACATGAAGTTCTTTGCCACCCCTGGGTTCAGGTTGGAGGTGTTGCTCCTGATAAACCACTTGATTCTGCTGTCTTGTCTCGTTTGAAGCAATTCTCTGCAATGAATAAGCTCAAAAAAATAGCCATTCGAGTGATTGCCGAAAGTCTGTCTGAGGAGGAAATTGCAGGATTGAAAGAAATGTTCAGGATGATAGACACTGATAATAGTGGACAGATCACTCTTGAGGAACTAAAAATTGGTTTGGAGAGAGTTGGGTCCGTCCTTAAAGATTCAGAAATTAATTGGTTAATGCAAGCAGCAGATGTAGATAACAGTGGTACAATAGACTATGGTGAATTCATAGCAGCTATGATTCATCTAAACAAGGTCCAAAAGGAGGATCATTTATTTGCAGCTTTCTCCTACTTTGACAAAGATGGGAGTGGATACATAACAAAGGATGAACTCCAACAAGCCTGTGTGCAGTTTGGTCTAAAAGATGATCACCTTGATGATATAATACGCGAAGTTGACAAGGATAATGATGGACTCATTGATTACAGTGAGTTTGCTGCAATGATGCAAGACACTGGTTTCGGCAAATTGCAAATAGCTTGA 1857 0.4346 MGNNCVGPNSLGGNGFLQSVSAAVWKTRPPDARLLPPNNATDAAATTDNNNNKSTTSPPKDSSKDSSIGKGSDGSKGNNDPPMPVRSTPPEPVKIAAAVETKPMPVQPKKPVQPVVNNGLAPVNISAGPDGGGGGDDGKAKKPTHVKRLSSMGLQVESVLGRKTGNLKDIYSLGRKLGQGQFGTTFLCVEKGTNKEFACKSIAKRKLTTQEDVEDVRREIQIMHHMAGHPNVIQIIGAYEDAVAVHVVMQLCAGGELFDRIIQRGHYTERKAAELARLIVSVVEACHSLGVMHRDLKPENFLFINHEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKQYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISEPWPSISASAKDLVRRMLLRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFRMIDTDNSGQITLEELKIGLERVGSVLKDSEINWLMQAADVDNSGTIDYGEFIAAMIHLNKVQKEDHLFAAFSYFDKDGSGYITKDELQQACVQFGLKDDHLDDIIREVDKDNDGLIDYSEFAAMMQDTGFGKLQIA* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1063 618 ProSiteProfiles Protein kinase domain profile. 171 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1063 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Lan20g1063 618 ProSitePatterns EF-hand calcium-binding domain. 521 533 IPR018247 -
Lan20g1063 618 SUPERFAMILY Protein kinase-like (PK-like) 171 430 IPR011009 -
Lan20g1063 618 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Lan20g1063 618 SUPERFAMILY EF-hand 469 608 IPR011992 -
Lan20g1063 618 MobiDBLite consensus disorder prediction 125 147 - -
Lan20g1063 618 CDD STKc_CAMK 171 428 - -
Lan20g1063 618 ProSitePatterns Protein kinases ATP-binding region signature. 177 204 IPR017441 GO:0005524
Lan20g1063 618 ProSitePatterns EF-hand calcium-binding domain. 557 569 IPR018247 -
Lan20g1063 618 PANTHER SERINE/THREONINE-PROTEIN KINASE 101 611 - -
Lan20g1063 618 SMART efh_1 548 576 IPR002048 GO:0005509
Lan20g1063 618 SMART efh_1 512 540 IPR002048 GO:0005509
Lan20g1063 618 SMART efh_1 476 504 IPR002048 GO:0005509
Lan20g1063 618 SMART efh_1 582 610 IPR002048 GO:0005509
Lan20g1063 618 CDD EFh 548 608 IPR002048 GO:0005509
Lan20g1063 618 Pfam Protein kinase domain 171 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1063 618 Gene3D - 436 610 - -
Lan20g1063 618 ProSiteProfiles EF-hand calcium-binding domain profile. 508 543 IPR002048 GO:0005509
Lan20g1063 618 ProSiteProfiles EF-hand calcium-binding domain profile. 580 613 IPR002048 GO:0005509
Lan20g1063 618 SMART serkin_6 171 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1063 618 MobiDBLite consensus disorder prediction 40 74 - -
Lan20g1063 618 Pfam EF-hand domain pair 477 537 IPR002048 GO:0005509
Lan20g1063 618 Pfam EF-hand domain pair 547 608 IPR002048 GO:0005509
Lan20g1063 618 CDD EFh 477 537 IPR002048 GO:0005509
Lan20g1063 618 Gene3D Phosphorylase Kinase; domain 1 173 256 - -
Lan20g1063 618 Gene3D Transferase(Phosphotransferase) domain 1 257 433 - -
Lan20g1063 618 ProSitePatterns EF-hand calcium-binding domain. 591 603 IPR018247 -
Lan20g1063 618 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Lan20g1063 618 ProSiteProfiles EF-hand calcium-binding domain profile. 544 579 IPR002048 GO:0005509
Lan20g1063 618 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 101 611 - -
Lan20g1063 618 MobiDBLite consensus disorder prediction 28 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1063 Lan-Chr20 11981280 11988983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1063 1 615 EF-hand Containing Proteins AT2G38910 72.816 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan20g1063 Pkinase 2.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1063 K13412 - gmx:100813232 977.237