Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0999 ATGGCTTCAACAAGGAGCTGGCTTCAGAGGTTAAATCCTCAGGTTAAAACAAAGGTAGTTTCAAAGAAGAAGGGGGAGGATAATGATAATGGAGTAAATGATTATTCAAATGTGCATGTTGATGAAGTCACAAAGCAGAAGGTTGCAGCTGCAAAGCAGTATATTGAAAACCATTACAGGGAGAAAATGAAGAATCTTCAAGAAAGGAAGGAGCGTCGAACCGTCTTGGAAAAGAAGGTGTATGATGCTGATGTCTGTGAAGAGGATCAAAAGAACCTGTTTAAGTTTTTAGAGAAAAAGGAAACTGAATATATGCGCCTTAAGAGACATAAGATGGGTGCAGATGATTTTGAGTTGTTGACTATGATTGGCAGAGGTGCATTTGGGGAGGTCAGACTCTGTCGGGAGAAAACTACAGGTCATGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGTAGACGCCAGGTTGAGCATGTCATATCTGAAAGGAATCTCCTTGCTGAGGTTGACAGCAATTGCATTGTCAAACTTTATTGTTCATTCCAGGATGACGACTATTTGTATCTTATTATGGAATATCTACCGGGTGGGGATGTGATGACTCTTCTTATGAGAAAGGATACCTTGACTGAAGATGAAGCTAGATTTTATGTAGCAGAAATAGTTCTGGCTATCGAGTCTATACATAAACGCAATTATATACACAGGGATATCAAGCCCGATAACTTATTACTTGATAGATATGGGCACTTGAAACTGTCAGATTTTGGACTTTGCAAACCATTAGATTGTAGAACACTCGAAGAAAAGGATTTTTCTATGGGTCAGAGTGTAAACAGATCTAGATTTACACAGAATGGTGAACGTGCTGCTCCAAAACGCACACAACAAGAACAACTGCAACACTGGCAACAGAATAGAAGGACAGTGGCTTATTCCACAGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTGTTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTGGTAGGATATCCACCTTTTTATTCTGATGAACCAATAACAACATGTAGAAAGATTGTTAACTGGGAGTCTCACTTGAAATTTCCTGTAGAAGCAATGCTATCCCTAGAGGCTAAAGATCTCATTAGTAAACTTTTGTGTAATGTCGACCAGAGGCTGGGGTCTAAAGGTGCAGATGAAATAAAGGCTCATGCATTCTTTGAAGGTGTTGAGTGGAATAAGTTATATCAAATGGAAGCTGCATTTATTCCTGAGGTCAAGGATGAGCTAGATACTCAGAATTTCGAAGATTTTAAGGAGTCTAACATCCAAACTAAAACAGCAGCAAGGACTGGTCCATGTAGGAAGATGCTTTCGTCTAAGGATTTGAATTTCGTTGGATACACATATAAGAACTTTGAAATTGTCAACAATTATCAAGTTCCTGGGACAACTGAATTGAAGAAAAAGCCCTCCAAATTAAAGAGACCATCCATCAAAACACTTTTCGAGACAACACCAGAGGTACTTGAGGTTTCTGATACATCATCTCCAAGCAATAAATCTCCTAAAGGAAGCTTTTTAAAGGTCTTGCCAACTCAATTAGAGGTACATAAAAGATTATGA 1656 0.3865 MASTRSWLQRLNPQVKTKVVSKKKGEDNDNGVNDYSNVHVDEVTKQKVAAAKQYIENHYREKMKNLQERKERRTVLEKKVYDADVCEEDQKNLFKFLEKKETEYMRLKRHKMGADDFELLTMIGRGAFGEVRLCREKTTGHVYAMKKLKKSEMLRRRQVEHVISERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDVMTLLMRKDTLTEDEARFYVAEIVLAIESIHKRNYIHRDIKPDNLLLDRYGHLKLSDFGLCKPLDCRTLEEKDFSMGQSVNRSRFTQNGERAAPKRTQQEQLQHWQQNRRTVAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPITTCRKIVNWESHLKFPVEAMLSLEAKDLISKLLCNVDQRLGSKGADEIKAHAFFEGVEWNKLYQMEAAFIPEVKDELDTQNFEDFKESNIQTKTAARTGPCRKMLSSKDLNFVGYTYKNFEIVNNYQVPGTTELKKKPSKLKRPSIKTLFETTPEVLEVSDTSSPSNKSPKGSFLKVLPTQLEVHKRL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0999 551 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 522 - -
Lan20g0999 551 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Lan20g0999 551 SMART serkin_6 117 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0999 551 Gene3D Transferase(Phosphotransferase) domain 1 201 275 - -
Lan20g0999 551 ProSiteProfiles Protein kinase domain profile. 117 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0999 551 SMART pkinase_C_6 418 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan20g0999 551 Pfam Protein kinase domain 118 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0999 551 Gene3D Phosphorylase Kinase; domain 1 88 200 - -
Lan20g0999 551 Pfam Protein kinase C terminal domain 436 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lan20g0999 551 Gene3D Transferase(Phosphotransferase) domain 1 311 435 - -
Lan20g0999 551 Gene3D Phosphorylase Kinase; domain 1 436 446 - -
Lan20g0999 551 ProSiteProfiles AGC-kinase C-terminal domain profile. 418 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan20g0999 551 CDD STKc_NDR_like 115 481 - -
Lan20g0999 551 SUPERFAMILY Protein kinase-like (PK-like) 92 465 IPR011009 -
Lan20g0999 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Lan20g0999 551 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 37 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0999 Lan-Chr20 10711675 10721517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0999 40 547 AGC Kinase Gene Family AT3G23310 73.725 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lan20g0999 Pkinase 1.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0999 K08790 - gmx:100820558 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0999 20 10711675 10721517 Lan9g0486 9 7250450 7256157 PCT