Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0998 ATGGCGAGAGAAAGTGAGAATGGAATTGTAGTCAAAGCGATGCAATTCTCATACGAATACTCAGAAAAGGAACCACCATTGTTTATAGATTTCAACCTTAACGTATCTCCTGGATCACGGTGCTTATTGTTGGGTGCTAATGGATCTGGGAAAACTACATTGCTTAAGATTCTAGCGGGTAAACACATGGTTGGAGGAAGAGATGTAGTTCGTGTCTTGAATGGTTCTGCTTTTCATGATACCAAACTTGTTTGTAGTGGCGATCTTGCTTATTTGGGTGGATCATGGTCCAAGAACGTTTCCTCCGCTGGGGATATTCCGCTCCAAGGAGACTTCTCTGCTGAACATATGATATTTGGAGTTGAGGGCGCTGATCCTGACAGGAGAGATAAGTTGATCGATCTGCTTGATATAGATCTGAACTGGCGGATGCATAAGGTATCTGATGGGCAACGACGTCGAGTGCAAATTTGTCTTGGTCTTCTTCATCCATATAAGGTTCTCTTGTTGGATGAGGTTACCGTTGACCTGGATGTTGTTACTAGGATGGATTTATTGGACTTCTTCAAGGAAGAATGTGAACAGAGAGAAGCTACAATTGTATATGCAACTCACATTTTTGATGGACTAGAGACATGGGCAACTCATCTGGCATACATACAAGAGGGTGAGCTGAGGAGAGCAGAAAAAATATCAGATGTTAGCGAATTGAAGTCTTCGACTAATCTTCTATCTATTGTTGAGTCCTGGCTCCGAGCTGAAACAAAGCTTGAAAAGAAGAAGCCTGTCCACAAGGATTCCCACACTCAGAACACTTCTTTTGTTAGCTCTCCTTTCTTTTCGTCTAGACACATGGCATACTATCGATAG 870 0.4241 MARESENGIVVKAMQFSYEYSEKEPPLFIDFNLNVSPGSRCLLLGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTKLVCSGDLAYLGGSWSKNVSSAGDIPLQGDFSAEHMIFGVEGADPDRRDKLIDLLDIDLNWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELRRAEKISDVSELKSSTNLLSIVESWLRAETKLEKKKPVHKDSHTQNTSFVSSPFFSSRHMAYYR* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0998 289 SMART AAA_5 37 223 IPR003593 -
Lan20g0998 289 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 247 IPR003439 GO:0005524
Lan20g0998 289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 237 IPR027417 -
Lan20g0998 289 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 7 289 - -
Lan20g0998 289 Gene3D - 9 286 IPR027417 -
Lan20g0998 289 Pfam ABC transporter 30 174 IPR003439 GO:0005524
Lan20g0998 289 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 7 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0998 Lan-Chr20 10706664 10709628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0998 11 201 Calmodulin-binding Proteins AT2G36910 21.782 1.94e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0998 K12608 - gmx:100788503 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0998 20 10706664 10709628 Lan4g1321 4 22033276 22036748 LSH