Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0991 ATGGGTCTTAGAGACATTAGTGCTTCACTACCTCCTGGGTTTCGGTTTTATCCAAGTGATGAAGAATTGGTCCTTCATTACCTTTACAAGAAGATCACAAATGAGGAAGTTATGAAGGGTACTTTGGTGGAAATTGATTTGCACACATGCGAGCCATGGCAACTTCCTGAGGTGGCAAAGCTCAACGCAACAGAATGGTACTTCTTCAGCTTCCGTGACCGTAAATATGCAACCGGATTTCGAACCAATCGAGCTACGACATCTGGCTATTGGAAAGCAACAGGGAAGGATCGAACAGTGGTAGACCCAATCACACACGAGGTTGTAGGGATGAGGAAGACATTGGTGTTCTATAGGAATAGAGCTCCAAATGGTATCAAATCGAATTGGATCATGCATGAATTTCGCTTGGAGACCCCACATATGCCCCCTAAGGAAGACTGGGTTTTATGTAGAGTATTTCACAAAGGAAAAGAAGACAACAGTGCCAAACTTAACCCACAACTCATCTTTGATGCAATAGCTCCATCCTCAACAAACCAAACCATTCCTGTTGGGTATAACCAACTTGCTTATTTCACTTCCTCAACACCAAATAATATTCATCATCATCAAAACCTAAATGAAAACAATTCTTTGATGAATCTTCTTAATTATTCTCATGACACAAACACCAATTGTAGTGCTGTTACTCAAATTAGTCCAAAAGGTGATGATGGGTATGGGTTCTTATGGGACATGGATATTGAAGAAAATAGCTTCCATGATGGTGTGGCATCAAACTTAGATGGAATAAGATTCGAGGTTGATAATAATAGTATGGTGTCGCTATAA 834 0.4041 MGLRDISASLPPGFRFYPSDEELVLHYLYKKITNEEVMKGTLVEIDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPITHEVVGMRKTLVFYRNRAPNGIKSNWIMHEFRLETPHMPPKEDWVLCRVFHKGKEDNSAKLNPQLIFDAIAPSSTNQTIPVGYNQLAYFTSSTPNNIHHHQNLNENNSLMNLLNYSHDTNTNCSAVTQISPKGDDGYGFLWDMDIEENSFHDGVASNLDGIRFEVDNNSMVSL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0991 277 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lan20g0991 277 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Lan20g0991 277 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 272 - -
Lan20g0991 277 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Lan20g0991 277 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Lan20g0991 277 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0991 Lan-Chr20 10553547 10558766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0991 6 178 NAC Transcription Factor Family AT1G56010 53.591 3.05e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan20g0991 NAM 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0991 - - ccaj:109788642 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1348 11 20355083 20361612 Lan20g0991 20 10553547 10558766 LSH