Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0971 ATGCCTCATCTCAAACCACTTCAAACCCTACTTTCTCTCTCCACCCTTTCCCTCCTCCTCTTCCTATCCTCCCCCGTCGTCGCCGATGACGACTCCGCCGTGATGTCCGCCTTCCTAAAATCCCTGACGCCACCACCCTCCGGCTGGTCATCAACCACCCCATACTGCTCCTGGACAGGCATAAAATGCGACTCCTCAAACCGCGTGACCACAATAACACTCTCTTCACACTCCCTCACAGGAACACTCCCTCCCAACCTCAACTCTCTCTCCCAACTCACCTCTCTCTCTCTCCAGAACAATTTCCTCTCCGGACCTCTCCCTTCTCTCTCCAATCTCTCTCTCCTTCAATCCGTTTTCCTTAACCGTAACAATTTTACCTCTTTACCCTTCCCTTCCCCTTCTTTTTCTAACCTCCCTTCACTTCAAACCTTATCCCTCTCAAATAACCTTAATCTCCCTCCTTGGCACTTTCCATCCGAGTTAACTAACTCACCCAACCTCAACCTCCTTGACCTTGGAACCGTTTCGCTTACTGGTCCGTTACCGGATCTGTTCGACTCGTTTCCATCCCTACTTAACCTACGACTTTCCTATAATAACCTCACTGGTGTGTTACCGGATTCTCTAGCGAAATCCGGTATTGCAAACTTGTGGCTCAATAACCAGGAAACCGGTTTGTCCGGTTCAATTGAGGTTCTGGCAAACATGACACTGTTGAAGCAAGTGTGGCTGCATAAAAATCTGTTTACTGGTTCGATTCCGGATTTGTCGAATTGCGAAAATTTGTTTGATCTGCAACTTAGGGATAATCAGTTGACTGGCATTGTTCCGGTTTCACTGATGAGGCTTTCGAGTTTGTTGAATGTGTCTTTGGATAACAATATGCTGCAGGGGCCTGTGCCGGAGTTTGGTAATGATGTGACGGTTACTTTGCATGGGGTTAACAGTTTTTGTAGGGACGATGTAGGGCCTTGTGATGAGAGGGTGATGGTTTTGCTTGAGATAGCGAAGGGGTTCGGGTATCCGATTAGGTTGGCGAATTCGTGGAGAGGGAATGATCCTTGTGATGGTTGGAGTTTTGTTGTGTGTAATGAAGGGAAGATCACCAGTGTGAACTTTGCGAAACAGGGTTTGCAGGGAACCATTTCGCCTGCGTTTGCGAAATTGACTGATTTGAGGAACTTGTATTTGGGTGAGAACAATTTGACTGGTTCTATACCTGAGAGTTTGACAACTTTGCCCCAACTTGCTACTCTTGATGTATCTAATAATAATCTGTTTGGGGAAGTTCCGAAGTTTTCATCAAAAGTGAAGTTGGTAACTACTGGTAATGTTTTGATTGGAAAACTTCCTAGTTCTGGAAGTGGAGGAAGTGGAAATGGAGGTGGAAATGGGAGTGGAAGTAGTCCTTCTGTGGGGTCTGCGCCGAGTGGAAGTCCGGTTCAATTGGGGAATGGTAGTTCATTAACGACGGGTTGGATTGCCGGTATTGTGGTTATTGTTTTGTTTTTTGTTGCAGTTGTTTTGTTTGTTAGTTTCAAGTGTTATGCCAAAAAGCGGCACCAGAAATTTGGAAAGGTTGATAATACTGAAAGTGGGAGAGGAAATATCAAATTCGATGAAATGAGTGTTTCTAAAGGTTATAGTGGTATTGCTAGCGAGTTGCAAAGCCAGAGCAGTGGTGATCGAAGCGACGTTAATGTTTTTGAGAGTGGAAGTGCTACGATTTCGATCCAAGTTCTTAGGCAGGTAACAGATAATTTCAGTGAAGATAACATTTTAGGAAGGGGAGGGTTTGGAGTTGTTTATAAAGGTGAGTTGCATGATGGAACTAAAATTGCTGTGAAGAGGATGGAATCTGTTGCAATTGGGACCAAAGGATTGAATGAGTTTCAAGCTGAGATTGCTGTTCTTACTAAAGTTAGGCATAGGCATTTGGTTGCTCTTCTAGGATATTGCATCAATGGCAATGAGAGGCTTTTGGTGTTTGAGCACATGCCTCAAGGGACATTAACCCAGCATCTGTTTGAATGGCATGAACTAGGGTATGCGCCTCTGACATGGAAGCAAAGGGTAGCGATAGCTTTGGATGTAGCACGTGGAGTGGAATACTTGCATAGTTTAGCACAACAAAGCTTCATTCACAGAGACTTAAAACCCTCAAACATACTGTTAGGTGATGACTTGAGAGCAAAGGTTTCAGATTTTGGATTGGTTAAAAATGCACCAGATGGGAAGTATTCTGTCGAGACAAGGTTGGCAGGAACATTCGGGTATCTTGCACCTGAGTATGCAGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCATTTGGAGTGGTTTTGATGGAACTTGTCACTGGTAGAAAGGCTTTGGATGATAATATGCCTGATGAAAGGGCTCACTTGGTTTCATGGTTCCGCCGGGTTCTAATCAACAAGCAGAACATCCCAAAGGCAATTGACCAAATTCTCGACCCCGATGAGGAAACCATGGAGAGCATATATAAAGTTGCTGAGCTGGCAGGCCATTGCACTGCTCGCGAACCATACCAAAGGCCAGATATGGGGCATGCCGTGAATGTCTTGGTTCCTCTTGTGGAGCAATGGAAACCTACAACTCATGAAGAAGAAGACGGCTGTGGCATTGACCTTCAGATGAACCTTCCACAAGCTGTACAAAGATGGCAAGCCAATGAAGGCACTTCCACAATATTGAATAACATGTCCTTCTCCCAGACTCAATCAAGTATCCCCTCTAAACCTTCAGGATTCGCCGACTCTTTTGATTCACTGGATTGCCGGTAA 2814 0.451 MPHLKPLQTLLSLSTLSLLLFLSSPVVADDDSAVMSAFLKSLTPPPSGWSSTTPYCSWTGIKCDSSNRVTTITLSSHSLTGTLPPNLNSLSQLTSLSLQNNFLSGPLPSLSNLSLLQSVFLNRNNFTSLPFPSPSFSNLPSLQTLSLSNNLNLPPWHFPSELTNSPNLNLLDLGTVSLTGPLPDLFDSFPSLLNLRLSYNNLTGVLPDSLAKSGIANLWLNNQETGLSGSIEVLANMTLLKQVWLHKNLFTGSIPDLSNCENLFDLQLRDNQLTGIVPVSLMRLSSLLNVSLDNNMLQGPVPEFGNDVTVTLHGVNSFCRDDVGPCDERVMVLLEIAKGFGYPIRLANSWRGNDPCDGWSFVVCNEGKITSVNFAKQGLQGTISPAFAKLTDLRNLYLGENNLTGSIPESLTTLPQLATLDVSNNNLFGEVPKFSSKVKLVTTGNVLIGKLPSSGSGGSGNGGGNGSGSSPSVGSAPSGSPVQLGNGSSLTTGWIAGIVVIVLFFVAVVLFVSFKCYAKKRHQKFGKVDNTESGRGNIKFDEMSVSKGYSGIASELQSQSSGDRSDVNVFESGSATISIQVLRQVTDNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAIGTKGLNEFQAEIAVLTKVRHRHLVALLGYCINGNERLLVFEHMPQGTLTQHLFEWHELGYAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDLRAKVSDFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELVTGRKALDDNMPDERAHLVSWFRRVLINKQNIPKAIDQILDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTTHEEEDGCGIDLQMNLPQAVQRWQANEGTSTILNNMSFSQTQSSIPSKPSGFADSFDSLDCR* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0971 937 SUPERFAMILY Protein kinase-like (PK-like) 565 865 IPR011009 -
Lan20g0971 937 ProSiteProfiles Protein kinase domain profile. 589 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0971 937 ProSitePatterns Protein kinases ATP-binding region signature. 595 617 IPR017441 GO:0005524
Lan20g0971 937 SMART LRR_typ_2 189 212 IPR003591 -
Lan20g0971 937 SMART LRR_typ_2 139 160 IPR003591 -
Lan20g0971 937 SMART LRR_typ_2 390 414 IPR003591 -
Lan20g0971 937 SMART LRR_typ_2 113 138 IPR003591 -
Lan20g0971 937 Gene3D Phosphorylase Kinase; domain 1 550 666 - -
Lan20g0971 937 PANTHER OSJNBA0070M12.3 PROTEIN 18 937 - -
Lan20g0971 937 Gene3D Ribonuclease Inhibitor 28 326 IPR032675 -
Lan20g0971 937 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Lan20g0971 937 Pfam Leucine rich repeat N-terminal domain 332 365 IPR013210 -
Lan20g0971 937 SMART serkin_6 589 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0971 937 CDD STKc_IRAK 595 868 - -
Lan20g0971 937 MobiDBLite consensus disorder prediction 452 482 - -
Lan20g0971 937 Gene3D Ribonuclease Inhibitor 328 451 IPR032675 -
Lan20g0971 937 SUPERFAMILY L domain-like 39 306 - -
Lan20g0971 937 Gene3D Transferase(Phosphotransferase) domain 1 667 889 - -
Lan20g0971 937 Pfam Leucine rich repeat 384 427 IPR001611 GO:0005515
Lan20g0971 937 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 18 937 - -
Lan20g0971 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Lan20g0971 937 SUPERFAMILY L domain-like 330 452 - -
Lan20g0971 937 Pfam Protein kinase domain 590 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0971 Lan-Chr20 9964246 9968172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0971 69 880 Receptor kinase-like Gene Family AT1G55610 31.350 2.72e-95 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lan20g0971 Pkinase 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0971 - - gmx:100286794 1244.18