Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0950 ATGGAGTATACTCAGGGAAACCGTGATCACCAACATGATGGTGGTTCTAGTTCAAAGAAGAGGAACTGTCATCGCCATACTCCAAGCCAGATTCAAAGGCTTCAATCAATATTCAAGGAGTACCCACATCCAGATGAAAAACTGAGGATGCGATTAAGCAGAGAACTAGGTATTACGCCTAAACAGGTTAAGTTTTGGTTTCAGAATCATAGGAATCAAATGAAGGTTCAGCGTGAAAGACTTGATATCTTCAAGCTAAGGGATAATAATGACAAGATAAGAAGTGAGAACATTGCTTTAAAGGAGGCATTGAAAAATTGCATATGCCCTAATTGTGGTCCAGTTACTGTTGATGGAGATTCTTTCATGGATGTGCAAAGGATGAGATTAGAGAATCTCCAACTCAAAGAAGAGCTTGATAGGGTATCCAACATTGCAGCTATGTACACCGGAAAACCATGGGTATAA 468 0.3974 MEYTQGNRDHQHDGGSSSKKRNCHRHTPSQIQRLQSIFKEYPHPDEKLRMRLSRELGITPKQVKFWFQNHRNQMKVQRERLDIFKLRDNNDKIRSENIALKEALKNCICPNCGPVTVDGDSFMDVQRMRLENLQLKEELDRVSNIAAMYTGKPWV* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0950 155 ProSitePatterns 'Homeobox' domain signature. 52 75 IPR017970 GO:0000981|GO:0006355
Lan20g0950 155 CDD homeodomain 24 78 IPR001356 GO:0003677
Lan20g0950 155 MobiDBLite consensus disorder prediction 1 20 - -
Lan20g0950 155 Pfam Homeodomain 22 75 IPR001356 GO:0003677
Lan20g0950 155 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 10 154 IPR042160 -
Lan20g0950 155 Gene3D - 4 86 - -
Lan20g0950 155 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 10 154 - -
Lan20g0950 155 SUPERFAMILY Homeodomain-like 12 78 IPR009057 -
Lan20g0950 155 ProSiteProfiles 'Homeobox' domain profile. 17 77 IPR001356 GO:0003677
Lan20g0950 155 MobiDBLite consensus disorder prediction 1 28 - -
Lan20g0950 155 SMART HOX_1 17 81 IPR001356 GO:0003677
Lan20g0950 155 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0950 Lan-Chr20 9412849 9413967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0950 19 153 Homeobox Transcription Factor Family AT1G73360 60.000 1.51e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lan20g0950 Homeodomain 1.7e-16 CL0123