Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0945 ATGGATTTCACTGAGAAAATGCATCGCCTCAAGATGGGGTTTCGTGACTATATCCAAGCATTAGAACAAGAACGTTGTAAGATTCAGGTTTTCTCTAAAGAGCTTCCTCTTTCTTTGGACCTGATCACACAAGCTATTGAAGCTTGTAGGCAACAGTTATCAGGAACAACAACAGAGTATAATTTGAATGTGCAATCTGAGTGTTCAGGACAGACAACATCAATGGAAGGTCCTGTTTTTGAGGAATTCATTCCAATTAAGAAGAGGGCATCCTCTGATTGTGATGATGAGGATGAACAACATTCACATAAGTCCAAGGTTTCAAAGGATAACAATAAGAACAACACTGATAAGAGGAAATCAGATTGGCTTAGATCTGTTCAATTATGGAATCCAAATCCACTAGCTGAAGAGGATTTGAGTAGAGAAGTGTCTGTGATGGAAGTAAAGAGAAGTGGAAGTGGTGGTGGTTTCTACCCATTCCACAAGGAGGAGAAAGCTGGCAAGACTATTGAATTGTTATGTAAAGCACCCTCTATAATGCCAGTAGTTGCAGCAAGTTCTACAGCGGTGACAGTCGCCAAAGACAATGCTGAAAGCAGCAAAAAAGAAGAGAAAGACGGGGACAGAAAGCAGCGCCGATGCTGGTCACCGGCATTGCATAAGAGCTTCTTGCAGGCCCTCCAGCAGCTTGGTGGTGCAGATACTGCAACACCAAAGCAAATCAGAGAGCTAATGAAGGTTGATGGCCTAACAAATGATGAAGTGAAAAGCCATTTACAGAAATACCGTTTGCACACTAGAAGACCAAGTCCCATGAATCACAACAATGGCAATCCACAGGCTGCACCTTTTGTCCTTGTGGGCAACATTTTTCTTCAACCACATGAGTACACAGCTTTAGCTACCTCAACAGCATCAACAGATCTGACCACCGTTGAGACACGTACCGGAATGCATGCACCGCTGGCCTCAAATCCTCCGACTCTTTCGCATGCACTAGCTGCGGCAATTAAGAAGCCACCAGTTAAGAAAGTAGAGCCTTATAAGTATTCAGAAGAAAGGGCTAATCAAAGTGAAGGGGCTGTTCATTCAAACTCCCCTGCCTCATCATCCTCCACACATACCACCACAACTTCCCCTGGTTACTGA 1152 0.4384 MDFTEKMHRLKMGFRDYIQALEQERCKIQVFSKELPLSLDLITQAIEACRQQLSGTTTEYNLNVQSECSGQTTSMEGPVFEEFIPIKKRASSDCDDEDEQHSHKSKVSKDNNKNNTDKRKSDWLRSVQLWNPNPLAEEDLSREVSVMEVKRSGSGGGFYPFHKEEKAGKTIELLCKAPSIMPVVAASSTAVTVAKDNAESSKKEEKDGDRKQRRCWSPALHKSFLQALQQLGGADTATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPMNHNNGNPQAAPFVLVGNIFLQPHEYTALATSTASTDLTTVETRTGMHAPLASNPPTLSHALAAAIKKPPVKKVEPYKYSEERANQSEGAVHSNSPASSSSTHTTTTSPGY* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0945 383 MobiDBLite consensus disorder prediction 358 383 - -
Lan20g0945 383 Gene3D - 210 268 - -
Lan20g0945 383 SUPERFAMILY Homeodomain-like 210 269 IPR009057 -
Lan20g0945 383 MobiDBLite consensus disorder prediction 197 214 - -
Lan20g0945 383 MobiDBLite consensus disorder prediction 341 383 - -
Lan20g0945 383 MobiDBLite consensus disorder prediction 91 120 - -
Lan20g0945 383 MobiDBLite consensus disorder prediction 194 214 - -
Lan20g0945 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 379 IPR044787 GO:0003700|GO:0006355
Lan20g0945 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 268 IPR017930 -
Lan20g0945 383 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 379 - -
Lan20g0945 383 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 266 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0945 Lan-Chr20 9250067 9252489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0945 1 324 G2-like Transcription Factor Family AT1G68670 46.221 5.58e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan20g0945 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0945 - - aprc:113872943 480.715