Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0936 ATGAGTGATCCATATGGGTTGCCGGAGGATCTCCGGCGACTCATTTCATCTTCAAGAACAACCCATTTCAACACTACTACACATCTTCATCAACCACCACCACCTCTTCCTCCTCCACCCTATGACCCTAATATCATGGTTGGGGATGTTTTCTTCCCTCCCCGTTCTTCCTTCACACACTTCAATCATTATCATCATCATCATCATAACCATGACTTTTATAATTCCTCATCTACTCTCAATCATACATCAACTAACACTAATACTATTTCTGCTACTCCTACTGTTGCTGCAACTGCTTCAGATTATGCTGCTGCTGCTGCTACTGCACCATTCTGTAGTGTAGAGAATAATACAGCTGCAGAAAAAGGTTGGCTTGGTTTTGATCCTGGTAACAATAGATGGCCTAGACAAGAGACCCTTTCTCTTCTAGAGATCAGATCTCGTCTTGATTCTAAGTTTAGAGAGAATAATCTCAAAGCACCTTTGTGGAATGAAATTTCTAGGATAATGGCTGAGGAATTTGGTTACCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAAACCAAAGAAGGTAAAGGTAGTAGACAAGATGGAAAGCACTACAGATTCTTCAGGCAGCTTGAGGCAATATGTGGAGAACCAACCAATATTCACCATAATGCCTCAACTTCAGATAATAAAACCCATCATCATGATGCTTCAAACACTAGAGCTGGTTTTCAATCTCCAACCTTTGCAACAAACCAAGACAGTGTTAATGTTGATCACTTTCCTAACCACATGTCCTCAGAGAGCCTCAGTTTCTCAAACTTATCTGATCAATTAGAGACATCTTCATCTGAGAACAATGATGAGGATCTTTCAGCTATTGCATACATGATGAATCAATCAAGGGATAATAGTAATAAGCACAAGGGGTTAGAGTTAGAGCATAGACAAAGTGAAGGGAGGGTGAGAAAAAGCTGGAGAGGTAAAATTGAAGAGATTGTTGGTTCCCACACGAGGAAGATTATAGAGACTCAAGATGCATGGATGGAGAAGATGTTAAGTGTTGTTGAAAGAAGGGAACAAGAAATGGCATCTAAGGAAGAAGAAAGGAAGAGAAAAGAGTCAATGAGGTTTGATCAAGAAGTACATGAACTTTGGGCTAAAGAGAGAGCTTGGGTTGAAGCAAGAGATGCTGCATTGATAAAGGTTGTGAGGAAACATTTTGGTTTCAAAGAACTTGAGGCATTTCCATTACATCATGAAGCAATGGTTGTTGAAGAAGAACAACAAAACAAAAATAATGAGTATCCATGTGAAACTGCTAGTGGTAAATGGACAGAAATTGAGATATCAAATTTGATACAACTAAAGAATAGTTTTGAAGAGAGACTAAGAGAAAATGGGTGCTTGGTGCATAATGGTCTTTGGGATGAAATATCAGCAAAGTTGGGTTGTTTAGGCTTTGATAGGAGTGCAAGTGAGTGCAAACAAATATGGGATGAGATCAGCATTTCTCTGAGAGTAACAACAGTGGAGTGTAGTAGTAGTAGTGCTAATACAACAAGGCCTTGGTATTTGGGACTTAAGCTGAGGGATGATGATGAACTTTGA 1629 0.3917 MSDPYGLPEDLRRLISSSRTTHFNTTTHLHQPPPPLPPPPYDPNIMVGDVFFPPRSSFTHFNHYHHHHHNHDFYNSSSTLNHTSTNTNTISATPTVAATASDYAAAAATAPFCSVENNTAAEKGWLGFDPGNNRWPRQETLSLLEIRSRLDSKFRENNLKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKGSRQDGKHYRFFRQLEAICGEPTNIHHNASTSDNKTHHHDASNTRAGFQSPTFATNQDSVNVDHFPNHMSSESLSFSNLSDQLETSSSENNDEDLSAIAYMMNQSRDNSNKHKGLELEHRQSEGRVRKSWRGKIEEIVGSHTRKIIETQDAWMEKMLSVVERREQEMASKEEERKRKESMRFDQEVHELWAKERAWVEARDAALIKVVRKHFGFKELEAFPLHHEAMVVEEEQQNKNNEYPCETASGKWTEIEISNLIQLKNSFEERLRENGCLVHNGLWDEISAKLGCLGFDRSASECKQIWDEISISLRVTTVECSSSSANTTRPWYLGLKLRDDDEL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0936 542 PANTHER - 63 520 - -
Lan20g0936 542 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 63 520 - -
Lan20g0936 542 ProSiteProfiles Myb-like domain profile. 449 509 IPR001005 -
Lan20g0936 542 Coils Coil 355 382 - -
Lan20g0936 542 Pfam Myb/SANT-like DNA-binding domain 450 509 IPR044822 -
Lan20g0936 542 Pfam Myb/SANT-like DNA-binding domain 133 220 IPR044822 -
Lan20g0936 542 Gene3D - 451 513 - -
Lan20g0936 542 Gene3D - 135 197 - -
Lan20g0936 542 ProSiteProfiles Myb-like domain profile. 133 192 IPR001005 -
Lan20g0936 542 SMART sant 447 511 IPR001005 -
Lan20g0936 542 SMART sant 131 194 IPR001005 -
Lan20g0936 542 CDD GT1 133 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0936 Lan-Chr20 9146879 9150083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0936 134 513 Trihelix Transcription Factor Family AT5G03680 41.278 1.07e-80 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan20g0936 Myb_DNA-bind_4 1.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0936 - - lang:109336385 1020.76