Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0932 ATGGATATACCGAAACACCGTACCACTCGAGCTACGTCGCTCAGAGACGCCACTGAGTCCTCCAAGATGGAAGGAACCGGTAGCTGGGACGCTCTTGAATGGACCAAAATTGATCCAATTAATCGCTATGTCTCGAATGCGAATCTGGATTTCTTGCTCGACGCGGAGCAAGTTGTAGCCGAAGGACATGGGGTTGTCCTTGTTAATACAGATGATGCGGGCACATTGATGGTGACAAATTTTCGTCTTCTCTTTTTGAGCGAGGGAACTAGAAAAGTTATTGCCCTTGGAACAATACCACTAGCAACCATTGAGAAGTATAACAAGATAGTTGTAAAGGTTCAGTCAAATGCTCGTCAATTAGACAAGACACCACCACAAAGACTGCTCCAAGTGCTTGGAAAAGATATGAGAATTATAGTCTTTGGTTTCAGGCCTCGTACAAAACAGAGACGTGTGATATTTGATGCACTGCTGAGGTGTATAAAGCCAGCAAGATTGTGGGATCTTTATGCCTTTGCATCTGAACCTTCTAAGTTTATGAGCAGTTCTCCACAGGTGCGCTTATTGGATGAGTATTTTCGACTTCTTGGCAAAGGTTCCTGCCGTGCATCAATGAACATGATTGAAAGTCGGTCTTTCACCTTGTCAAATGACTTGTTGAGAATAAGCAGTGTGAATTCTAGCCACAAAATGTGCCAGACTTATCCATTTGCTTTGGTTGTTCCAAAGATTATAAGTGATGATGAAGTGCTCCAGGCTTCTAACTTTCGTGCAAGAGGTCGACTGCCTGTAGTTTCATGGTGTCATCCTGGTACTGGTGCAGTCCTTGCACGCTCATCCCAACCCTTAGTTGGTCTAATGATGAATATGAGGAGCAACATGGATGAAAAACTTGTGGCTGCTCTTTGCAGCAAACTTGATGATGGCTCGCGGAGAAAGCTATATATCGCTGATGCAAGGCCAAGGAAAAATGCATTAGCTAATGGGGCCATGGGAGGTGGTTCAGAATCCTCATCAAATTATTTTCAATCTGAGATAGTCTTTCTTGGGATAGACAACATCCATGCAATGAGAGACAGCTATGCTCGGCTCCGAGAATATGTGGACACTCATGGCAGAGCATCATCAGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCCACATGGGGTGGAGGCAATTTAAGTAGTATGTCTACTTCGGTATCAACCCTTGGGGATAGTGGATGGTTACTGCATGTTCAAAATGTCTTGGCTGGTTCAGCTTGGATTGCTGCTCGTGTTGCTATGGAAATGGCTTCAGTTCTTGTACATTGCAGTGATGGATGGGATAGAACAAGTCAGTTGGTTTCACTTGCTAATTTGTTGCTTGATCCATATTACCGGACATTCAAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTTGCATTTGGTCATCCATTTTCTGATCGCGTGGGAATGCCATCTCTCCCTGGAAATGGTAACATGCCTTTCGAGTTATCTAGACAGTCTTCAACTGGCAATTCCTCATCATCGCCCATGCGTCAGTCATCAGGAGCATTTACACCTCAACCTCAAGCTTCATCTCACTCACATAATTCAAACAACTACTCCCCCATTTTTTTGCAGTGGGTTGATTGTATTTCACAATTGTTGCGGATGTATCCTTTTGCTTTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTTTTGGACTGCATGCTTTCTTGTCGTTTTGGAAATTTCTTGTGCAATTGCGAGAAAGAGAGGCTGCAATGCAATGTTTTTGAAGCTTGTGGGTGCTTGTGGGCATATTTGGCTGATTTGCGTACATCAGAAGGAGGTTTCCATGTGCATTATAATCCCTTTTATGAACCGCTGAAGCACAATGGTCCTCTTCTGCCCCCAGCAGCAGCGTTGGCCCCAACTTTATGGCCCCAATTTCACCTTCGTTGGGCCTGTCCAGAAGAAGCAAAACCTGGGGAGATTGAAGAACAATGTAGGAAGATAATTATGAAAAACTCAGAGATGCAGAAGGCTAAAGAAGTGGCAGAAAGGAAAGCCAGAGAAATCTCAAATGCAATGGAGGCATTGAATGCAGAATTACGAATGGAGAAGCAGCGAAACAGCTCAGCTATGAACATTGCCAAGAGGACAAACAAAGAAAATACGGCCATAAAGCGTGCAGTTCAGTCAATTGGGTGCAAGATTCACTTCTCTGCTAGTGGCGATTGCATTGTTGACATTGAAAGCAACCTATTGAAAGCAGCACCAAACTGTTTGCATTCTTCCCATGGGAAAGAATCAGATGGTACTTTGCATGATAACAAAAAGGACATGTCTGTTTCAGTAACAGTTACAGCAGATAACAATGATCAAATCAGCTCAATTGGTCGAGTATGTGAAACTCTATGCCCATTTCGCTCTGCAGATGGAGGCTGCAGGTGGCCAAGCGGTGGTTGTGCTCAACTAGGTAGCCAGTTTGTCGGTATGAAGGCAAATTTTGATGCATTTGACCAACTGTCAATTAACGATAGCTATTTCAAGTCGGAGTAA 2559 0.4392 MDIPKHRTTRATSLRDATESSKMEGTGSWDALEWTKIDPINRYVSNANLDFLLDAEQVVAEGHGVVLVNTDDAGTLMVTNFRLLFLSEGTRKVIALGTIPLATIEKYNKIVVKVQSNARQLDKTPPQRLLQVLGKDMRIIVFGFRPRTKQRRVIFDALLRCIKPARLWDLYAFASEPSKFMSSSPQVRLLDEYFRLLGKGSCRASMNMIESRSFTLSNDLLRISSVNSSHKMCQTYPFALVVPKIISDDEVLQASNFRARGRLPVVSWCHPGTGAVLARSSQPLVGLMMNMRSNMDEKLVAALCSKLDDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFLGIDNIHAMRDSYARLREYVDTHGRASSDGMSSFLRHGGSTWGGGNLSSMSTSVSTLGDSGWLLHVQNVLAGSAWIAARVAMEMASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFKGFQALVEKDWLAFGHPFSDRVGMPSLPGNGNMPFELSRQSSTGNSSSSPMRQSSGAFTPQPQASSHSHNSNNYSPIFLQWVDCISQLLRMYPFAFEFSAAFLVDFLDCMLSCRFGNFLCNCEKERLQCNVFEACGCLWAYLADLRTSEGGFHVHYNPFYEPLKHNGPLLPPAAALAPTLWPQFHLRWACPEEAKPGEIEEQCRKIIMKNSEMQKAKEVAERKAREISNAMEALNAELRMEKQRNSSAMNIAKRTNKENTAIKRAVQSIGCKIHFSASGDCIVDIESNLLKAAPNCLHSSHGKESDGTLHDNKKDMSVSVTVTADNNDQISSIGRVCETLCPFRSADGGCRWPSGGCAQLGSQFVGMKANFDAFDQLSINDSYFKSE* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0932 852 Coils Coil 675 709 - -
Lan20g0932 852 SUPERFAMILY PH domain-like 52 174 - -
Lan20g0932 852 SMART gram2001c 49 111 IPR004182 -
Lan20g0932 852 MobiDBLite consensus disorder prediction 1 24 - -
Lan20g0932 852 PANTHER MYOTUBULARIN-RELATED 19 851 IPR030564 -
Lan20g0932 852 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 19 851 - -
Lan20g0932 852 CDD PTP-MTM-like 261 552 - -
Lan20g0932 852 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Lan20g0932 852 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 212 654 IPR029021 -
Lan20g0932 852 ProSiteProfiles Myotubularin phosphatase domain. 167 650 IPR010569 -
Lan20g0932 852 Pfam Myotubularin-like phosphatase domain 171 591 IPR010569 -
Lan20g0932 852 MobiDBLite consensus disorder prediction 503 534 - -
Lan20g0932 852 Gene3D - 63 162 IPR011993 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0932 1 850 Protein tyrosine phosphatase (PTP) family AT3G10550 67.916 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0932 K18081 - gmx:100781842 1399.8