Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0904 ATGGGAATTGCAGTGGCTGGTGCTGATGATCTGTTGAGTGAAAAAGCAGCAAAGATGAGAGAGTCTCTGCAAAAGAGCCAAACCATCACAGATAATGTTGTTTCCATCCTTGGCTCCTTTGATCACCGTCTCTCCGCCCTTGAAGCCGCCATGCGCCCAACTCAGATTAGGACTCATTCTATTAGGAAAGCTCATGAGAATATTGATAAGACTTTGAAAGCTGCAGAGGTCATATTGGCTCATTTTGATCAAATTCGTCAGGCGGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAGCTATCTTCAAGCAATTGCTAAGCTGAGAAGCAACATTCAGTTTTTTGGCAGTATCAAGGGTTGTAAGAGTAGTGATACTGTCATCAACCATGCCAATAATTTGCTTGCTAAAGCTATTTCTAAGTTAGAAAATGAGTTTAAGCAGCTATTATCATCTTACAGCAAACCAGTGGAACCTGAGCGCCTCTTTGATTGCCTTCCAAACTCAATGCGACCTTCATCAGGATCGCCTTCCCATGAGGGTGATCCTAATGTCAAGAACCATTCTAATCACCATTCTGAGGCACACAACAATACTGCTGATGCTGTTGTATATACACCACCCGCTCTTATACCGCCAAGAGTTTTGCCCCTGCTACATGATTTAGCTCAGCAAATGATTGATGCTGGTCATCGACAACAATTACTCAAAATATACAGAGATGTTCGTTCCAATGTATTAGAGGAAAGCCTCCGAATGCTTGGTGTTGAAAAACTCAGCAAAGATGATGTCCAAAAGCTACAATGGGAGATCTTGGAAGCCAAAATTGGAAACTGGATTCATTACATGCGTATAGCTGTCAAATTGTTGTTTGCTGGTGAAAGGAAAGTTTGTGATGAAATATTTGAAGGCTTTGATTCTCTCAGTGAACAGTGTTTTGCTGAGGTGACTACAAATAGTGTTTCTATGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCGGAAAAGTTATTTGTGCTTTTGGACATGTACGAAATAATGCAAGAGCTCCAGTCAGAGATCGAAACACTCTTTAAAGGGAAAGCTTGCATGGAAATACGAGACGCTGCAATTGTTTTGACAAAACGACTTGCTCAAACTGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCGACAAAGACTGCAGTAACAGATGGAACTGTCCATCCGTTGACAAGCTATGTTATTAACTATGTGAAGTTTTTATTTGACTACCGCTCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGTACAAAGGATTCTCCACAGCTAGCATCTGTAACAATGCGCATAATGCAAGCTTTGCAAACCAATTTAGACGGTAAATCAAAGCAGTATAAAGACCTCGCATTGACGCATCTTTTTCTCATGAACAATGTTCATTATATTGTTAGATCAGTTCGTAGGTCTGACGCCAAGGATTTACTGGGGGATGATTGGGTACAAAGACACAGGAGGATTGTTCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTGTCTATCCAGGGCCTTACCTCATCAGGCGGCGGGAGTGGTGGTGATGGTGGAACCGGAAGTAACAGTGGTGCTTCAAGAGCAGTTGTTAAAGACAGATTTAAGACATTCAATGTTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACGGTTCCTGACAGCGAATTGCGAGAGTCTCTTCGGCTTGCCATTGCTGAAGTCTTGATGCCTGCCTATAGATCATTTGTGAAACGTTTCGGATCTCTAGTAGAGAATGGAAAGAATCCTCATAAGTTCGTGAAATACACAGCGGAGGATCTAGATCGAATGTTGGGTGAATTTTTCGAAGGAAAAAACATGAACGAAACCAGGCGCTAA 1956 0.4187 MGIAVAGADDLLSEKAAKMRESLQKSQTITDNVVSILGSFDHRLSALEAAMRPTQIRTHSIRKAHENIDKTLKAAEVILAHFDQIRQAEAKILKGPHEDLESYLQAIAKLRSNIQFFGSIKGCKSSDTVINHANNLLAKAISKLENEFKQLLSSYSKPVEPERLFDCLPNSMRPSSGSPSHEGDPNVKNHSNHHSEAHNNTADAVVYTPPALIPPRVLPLLHDLAQQMIDAGHRQQLLKIYRDVRSNVLEESLRMLGVEKLSKDDVQKLQWEILEAKIGNWIHYMRIAVKLLFAGERKVCDEIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELQSEIETLFKGKACMEIRDAAIVLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGTKDSPQLASVTMRIMQALQTNLDGKSKQYKDLALTHLFLMNNVHYIVRSVRRSDAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGGDGGTGSNSGASRAVVKDRFKTFNVMFEELHQKQSQWTVPDSELRESLRLAIAEVLMPAYRSFVKRFGSLVENGKNPHKFVKYTAEDLDRMLGEFFEGKNMNETRR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0904 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 647 IPR004140 GO:0000145|GO:0006887
Lan20g0904 651 MobiDBLite consensus disorder prediction 171 185 - -
Lan20g0904 651 Gene3D Exocyst complex component Exo70 76 651 - -
Lan20g0904 651 Pfam Exo70 exocyst complex subunit 280 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan20g0904 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 647 - -
Lan20g0904 651 MobiDBLite consensus disorder prediction 166 197 - -
Lan20g0904 651 SUPERFAMILY Cullin repeat-like 78 642 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0904 Lan-Chr20 8568365 8577212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0904 3 651 EXO70 exocyst subunit family AT5G03540 73.964 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0904 K07195 - gmx:100813987 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1290 11 19041152 19050073 Lan20g0904 20 8568365 8577212 LSH