Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0902 ATGGGGTACCTCTTATTGCTTCTATGTTTTTCTTTTGCTTCTACCTTGTTATATGATGCTTCTGCTTTGAACCCTGATGGATTGACTCTTTTGTCTCTCTTGAGCCACTGGACTAATGTTCCTAGTGACATAAACTCTACTTGGAAGGCCTCTGATTTCACTCCATGTTCTTGGGTAGGAGTGGAATGCAATGATGCCAACAATGTAATTTCTCTTAATCTCAGTGAATATTCCATTTTTGGTCAATTGGGACCTGAAATTGGAAACTTGAGTCACTTGCAAACCATAGATTTGTATGCTACTGGTTTCAATGGAGAAATTCCCTTACAACTAGGTGATTGTGGCATGCTTGAGTATTTAGAGCTTTCTTTAAACAACTTTAGTGGAGGAATACCTCAGAGCTTCAAAGACTTACAAAATTTGAAGTACATGGCCATGTTTTCTAATCAGCTTTCTGGTGAAATTCCTGAATCATTGTTTCAAATTCCTCACATTGAAGAATTGCACCTTAATAACAACAGTTTAAATGGTTCCATTCCCTCAAGTATTGGCCACATGACTCAGCTTGTGATGCTGGATCTAAGTGCTAATGAGTTGTCAGGGACAGTTCCAATATCCATTGGAAACTGTAGTAAATTAAAGTTTCTTGATTTGGATACCAATCTTCTGCAAGGAGTTCTTCCTTCTAGTCTAAACAATCTCACAAATCTTGACACTTTATATCTCTTTGGTAATGAGTTTGAAGGAACCATTCCTTTGGGATCTGGAAATTGCAAAAAGTTATCTATTTTGAGTCTTTCTTACAATGCATTCAACACAAGTATTCCACCAGGCTTGGGAAACTGCAGTGGTTTAACAGAGTTTTATGCTGCACAAGCTAACTTAGTTGGCACTATACCATCCACTTTAGGTCTCCTAAACAGTCTCTCTGTTCTAATACTTGCTGAGAACCAATTATCTGGGAAAATCCCTGCACAGATTGGTAATTGCAAGTCATTAGATAAGTTACACTTGTATTCCAATGCACTTGAGGGGGATATTCCTAGTGAATTAGGAAACTTGAGTCAATTGCGCGATCTTCGGCTGTATCAGAATTTTTTGATAGGGGAAATTCCACTTAGCATATGGAAAATTCAAAGCCTTGAGCATGTCCTTTTGTACAATAATAGCCTTTCTGGAGAGCTACCTATAGATATGACACAGCTTAAATTTCTTCAAAACATCTCATTGTTTAACAACCACTTCACCGGAGTCATACCACAAACCTTAGGAATTAACAGCAGCTTAGTGCAGCTGGACTTCATGTTCAATAGTTTTACTGGTACTCTCCCACCAAATCTTTGTTTCGGAAGCCGATTAGTGAGGCTCAATATGGGTTTCAATCAGTTTCATGGTAGCATACCTCCTGGTGTAGGAAGGTGTACAACTCTTACAAGGGTAAGACTTGAAGAGAATAATTTTACTGGCCCTCTTCCTGATTTTGAATTTAATCCAAATATCTCATACATGAGCATCAATAGCAATAATATCAGTGGAGCAATTCCATCAACTTTGGGAAACTGCACAAATCTTTCCTTTTTAAACTTGTCCATGAACAAGTTTATAGGTCTTGTACCCTCATCACTAGGAAACCTTGTGAATCTTGAGACTTTGGATCTTTCTCACAATAACTTGGAAGGTGCATTGCCACATGAGCTATCAAACTGCAGCAAAATGGGAAGGTTTGATGTGGGATTCAATTTCTTAAATGGTTCCTTTCCATCAAGTCTGCAAAACTGGACAACACTAACCACTTTGATTCTCAGAGAGAATAATTTTGGTGGTGGTATCCCAGATTTCTTGTCAGATTATGAAATGCTTACTGAGTTACAACTTGGTGGAAATATCTTTGGTGGAAATATTCCTAGATCAATTGGAAGATTGCAGAATCTGCTATATGGCTTAAATCTAAGTGCCAATGGGTTGATAGGTGAGCTTCCAGAGGAGATAGGAAACCTGAAGAATCTACTAGCACTGGATTTATCTTGGAACAATTTGACAGGAAGCATACAAGTTCTTGATGAACTCAGTTCATTATCTGAACTCAACATTTCACACAATTCTTTTGAAGGTTCTGTACCGGCACAGCTGATCAAGCCGAATTCTTCTCTATCATCATTTCTGGGTAATCCTGGACTATGTTTCAGTTTTTCATTATCAAATGTGTTGAATTCCACTGAAAGAAGCTATTTAAGACAATGTGAGACAAAAAAATCAAAAGGCCTTAGTGTTGTTGCAATTGTGATGATAGCACTTGGAATCTTCATATTTGTTGTTTTTCTGCTGCGACTAGTTTATATATATTTTATCAGAAGACTTAAGCAGGAAACCGGATGGTCAGATGAAGAGAACGCTTCAGAACTTCTCAACAAGGTGATGGAAGCAACAGAGAACCTGAATGATCAGTATATTATTGGAAGAGGAGCCTATGGAGTTGTTTATAAAGCTGCACTAGGTACAGACAGAATTGTTGCTGTGAAAAAGGTTTTATTTGCTCAGAATGAAGGGAGAAATATAAGCATGATGAGAGAAGTTGAAACCCTTGGAAAGATTCGGCATCGAAATTTGGTGAGATTGGAAGACTTTTATCTGAGAGAAAACTATGGTCTAATCATGTACACATACATGCCAAATGGAAGCCTTCATGATGCTTTGCATGAGAAGAATCCACCACAACACTTGGAGTGGAGTATCAGGTATAGGATAGCTGTTGGAGTTGCTCATGGATTGGCTTACCTCCATTTTGACTGTGATCCTGTCATAGTGCACCGCGACATCAAGCCGAGCAATATACTTTTAGATTCTGAAATGGAGCCTCATGTAGGAGACTTTGGTGTTGCTAAGCTTTTGGATCATACTTCTATCTCAACACAGTCAATATCAATTACTGGTACAACAGGCTATATTGCACCAGAGAATGCTTATACAACAAGAAAGGGTAAGGAGTCTGATGTGTACAGTTATGGGGTAGTTTTGCTGGAGCTGATATCCAGAAAGAAGGCATTGGATCCTTCATTTATGGAAGGAACAGATATTGTGCATTGGGTTAGATCTGTGTGGGAGGAAACAAGAGCAATTAATGCAATTGTTGATTCAATGCTTCTTGATGAAATTTCAGATCACAATGTAATGAGACAAGTTAACAAGGTGCTATTGTTGGCTTTGACATGTACTGAAAAGGATCCGCATAGTAGACCAACAATGAGAGATGTTGCTATGCTTTTGGAGAAGCAAACCTATGCATAA 3285 0.3836 MGYLLLLLCFSFASTLLYDASALNPDGLTLLSLLSHWTNVPSDINSTWKASDFTPCSWVGVECNDANNVISLNLSEYSIFGQLGPEIGNLSHLQTIDLYATGFNGEIPLQLGDCGMLEYLELSLNNFSGGIPQSFKDLQNLKYMAMFSNQLSGEIPESLFQIPHIEELHLNNNSLNGSIPSSIGHMTQLVMLDLSANELSGTVPISIGNCSKLKFLDLDTNLLQGVLPSSLNNLTNLDTLYLFGNEFEGTIPLGSGNCKKLSILSLSYNAFNTSIPPGLGNCSGLTEFYAAQANLVGTIPSTLGLLNSLSVLILAENQLSGKIPAQIGNCKSLDKLHLYSNALEGDIPSELGNLSQLRDLRLYQNFLIGEIPLSIWKIQSLEHVLLYNNSLSGELPIDMTQLKFLQNISLFNNHFTGVIPQTLGINSSLVQLDFMFNSFTGTLPPNLCFGSRLVRLNMGFNQFHGSIPPGVGRCTTLTRVRLEENNFTGPLPDFEFNPNISYMSINSNNISGAIPSTLGNCTNLSFLNLSMNKFIGLVPSSLGNLVNLETLDLSHNNLEGALPHELSNCSKMGRFDVGFNFLNGSFPSSLQNWTTLTTLILRENNFGGGIPDFLSDYEMLTELQLGGNIFGGNIPRSIGRLQNLLYGLNLSANGLIGELPEEIGNLKNLLALDLSWNNLTGSIQVLDELSSLSELNISHNSFEGSVPAQLIKPNSSLSSFLGNPGLCFSFSLSNVLNSTERSYLRQCETKKSKGLSVVAIVMIALGIFIFVVFLLRLVYIYFIRRLKQETGWSDEENASELLNKVMEATENLNDQYIIGRGAYGVVYKAALGTDRIVAVKKVLFAQNEGRNISMMREVETLGKIRHRNLVRLEDFYLRENYGLIMYTYMPNGSLHDALHEKNPPQHLEWSIRYRIAVGVAHGLAYLHFDCDPVIVHRDIKPSNILLDSEMEPHVGDFGVAKLLDHTSISTQSISITGTTGYIAPENAYTTRKGKESDVYSYGVVLLELISRKKALDPSFMEGTDIVHWVRSVWEETRAINAIVDSMLLDEISDHNVMRQVNKVLLLALTCTEKDPHSRPTMRDVAMLLEKQTYA* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0902 1094 Pfam Protein kinase domain 816 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0902 1094 PRINTS Leucine-rich repeat signature 189 202 - -
Lan20g0902 1094 PRINTS Leucine-rich repeat signature 545 558 - -
Lan20g0902 1094 ProSitePatterns Protein kinases ATP-binding region signature. 818 841 IPR017441 GO:0005524
Lan20g0902 1094 SUPERFAMILY Protein kinase-like (PK-like) 803 1089 IPR011009 -
Lan20g0902 1094 SUPERFAMILY RNI-like 408 718 - -
Lan20g0902 1094 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 2 1084 - -
Lan20g0902 1094 Gene3D Phosphorylase Kinase; domain 1 787 888 - -
Lan20g0902 1094 SMART serkin_6 812 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0902 1094 Gene3D Ribonuclease Inhibitor 349 428 IPR032675 -
Lan20g0902 1094 ProSiteProfiles Protein kinase domain profile. 812 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0902 1094 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Lan20g0902 1094 SMART LRR_typ_2 545 569 IPR003591 -
Lan20g0902 1094 SMART LRR_typ_2 306 330 IPR003591 -
Lan20g0902 1094 SMART LRR_typ_2 234 258 IPR003591 -
Lan20g0902 1094 SMART LRR_typ_2 138 162 IPR003591 -
Lan20g0902 1094 SMART LRR_typ_2 689 713 IPR003591 -
Lan20g0902 1094 SMART LRR_typ_2 259 282 IPR003591 -
Lan20g0902 1094 SMART LRR_typ_2 666 688 IPR003591 -
Lan20g0902 1094 SMART LRR_typ_2 186 210 IPR003591 -
Lan20g0902 1094 Gene3D Transferase(Phosphotransferase) domain 1 889 1093 - -
Lan20g0902 1094 ProSiteProfiles Leucine-rich repeat profile. 547 570 IPR001611 GO:0005515
Lan20g0902 1094 SUPERFAMILY RNI-like 71 462 - -
Lan20g0902 1094 ProSiteProfiles Leucine-rich repeat profile. 668 690 IPR001611 GO:0005515
Lan20g0902 1094 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Lan20g0902 1094 Pfam Leucine rich repeat 498 558 IPR001611 GO:0005515
Lan20g0902 1094 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Lan20g0902 1094 Pfam Leucine rich repeat 188 246 IPR001611 GO:0005515
Lan20g0902 1094 Gene3D Ribonuclease Inhibitor 188 348 IPR032675 -
Lan20g0902 1094 Gene3D Ribonuclease Inhibitor 429 737 IPR032675 -
Lan20g0902 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Lan20g0902 1094 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1084 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0902 Lan-Chr20 8557350 8561205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0902 14 1089 Receptor kinase-like Gene Family AT1G73080 51.551 0.0 1055
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan20g0902 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0902 - - gmx:100802056 1503.8