Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0871 ATGTTGCATGATGTTTTTGATCATCCAAAGGAGGAGGAGGAGCAGCAACTACCCATTGATGAAATTTCAATCCCAATTAGTGATCAAATTTTGGAGCTTTGTGACTCTGAATTGTTTTCAGATCCTCTTCAGAATTCTGAAGTTACTTCCAGCTCAAATTGTTGCTATGATGAAAACTCCTCATATGTGACAAATATAACTCTAGCTTTAGATGTAGACACTAAGTTGAATAGCAATAGCAATAATACAGTGACCACCCCGACTAGCACCATCACCACCACCACTACTACTACTACTGCCGCGAACAACAACACAACCAATAGCAGCAATCTTTCAATCCTATTTGACTCACAAGAAGAAATTGACAATGACATATCTGCCTCAATAGACTTATCATCATCTCAAAATTTCAATGTTCCACAATTTCTCCAAAGCCAGCAAGAACAGTTTGGTAATTTCTCTTGTTTGCAGCAGCCTAATGTGCAGCAACTAGCAGCATGTAATTCAGGTGTTGAAGGCTTCTCTCAGTATTCCACTGACCCTGTTGCACCACTTATGCAAGCTCCATTACCTTCTGTTTTTGAAGAGGATTGCATTTCTTCTGTTCCTTCTTATATGCCTCTTAACCCTTCTTCCCCTTCTTGCAATTTTCTTGGTCCTGGCATGGGACAATACATGCCTCAAGGCCCTCTTGCTACCGCCTTGTCTGCTGACCGTTCTGGATTGTTCGGTGCGAGTATGCTTCTTGGTTCCGAACTTCAGGCACAAGAGCATGAATACCAAGCAGAGAATGGTGGAATGTTTTGTACAGATTCATTGTCGCGGGTGTTTAACCCTCCAGATCTTCAGGCACTTGGTGTTGTTGAGAGTCAGCAACTAGTAGCAGGGGCTGGGAGTTCTGCCACTTTGACACCAGAAATCTCAACCTTGGAAGATTCTACCTTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGAAATGAAAGAAATTTCAGCAAGAAAATTAAGTATGCCTGCAGAAAAACTCTAGCAGATAGTCGACCTCGGGTTAGAGGAAGGTTCGCAAAGAATGATGACTTTGGTGATACACATAATAATCATAGATCTGCTAGTAGCAATCATGAAGATGATGATGATGAAGAAGTTGTGGTGAAAGAAGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATTAGTGGAGTGAACTCCTTCAAATGCAACTATTCAATCCAATCATGGATTTGA 1281 0.4067 MLHDVFDHPKEEEEQQLPIDEISIPISDQILELCDSELFSDPLQNSEVTSSSNCCYDENSSYVTNITLALDVDTKLNSNSNNTVTTPTSTITTTTTTTTAANNNTTNSSNLSILFDSQEEIDNDISASIDLSSSQNFNVPQFLQSQQEQFGNFSCLQQPNVQQLAACNSGVEGFSQYSTDPVAPLMQAPLPSVFEEDCISSVPSYMPLNPSSPSCNFLGPGMGQYMPQGPLATALSADRSGLFGASMLLGSELQAQEHEYQAENGGMFCTDSLSRVFNPPDLQALGVVESQQLVAGAGSSATLTPEISTLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTHNNHRSASSNHEDDDDEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0871 426 MobiDBLite consensus disorder prediction 361 391 - -
Lan20g0871 426 PANTHER CCT MOTIF FAMILY PROTEIN 19 426 - -
Lan20g0871 426 ProSiteProfiles CCT domain profile. 325 367 IPR010402 GO:0005515
Lan20g0871 426 MobiDBLite consensus disorder prediction 361 385 - -
Lan20g0871 426 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 19 426 - -
Lan20g0871 426 Pfam CCT motif 325 367 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0871 Lan-Chr20 8202750 8222074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0871 305 369 C2C2-CO-like Transcription Factor Family AT5G24930 41.538 6.05e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan20g0871 CCT 5.7e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0871 - - aprc:113871720 533.102