Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0843 ATGTCCGGATGGGACTCTCGTATTTATGAGAATGATTCTCAAGTTATCAAGAAAATTGTCAATGATGTATTGAAAAAGTTATTCCTAAGGTACCCTACTGAACTAAAAGTTAAAGGGCTTGTAGGAATTGATAAAATGTGTGAAGATATTCAGTTTTTGCTGTCAAAAAACAAACCAAACCAGTCACCAAAAAATGTTGAAGCAATTGGAATTTGGGGAATGGGTGGAATTGGAAAGACAACTATTGCTAGAGATGTGTTTTCTAAACTCTTTCCGTTATATGATAGTGTCTGCTTCTTGGAAAACATAAGAGAATTATCTAAAAAAGACCAACCAAGCAAACTGAGAGCTTTAAGTAATACACTTCTTTCTGAGCTACTTAAGGAAGAAAGTCCAAAATTTAATCCTTCAGGATCCACATTCATTGCAAGGAGGCTCAGTAGTAAAAAAGTTTTCATTGTGCTTGATGATGTTGATAGTTCAAATCAATTAGACATGTTATTAGAAGTATGTGAGTATGCAGCTCCAGGTAGTAAACTCATTATAACAACAAGAAATACCAAATTGCTTGATGGAAGAGTTGACAAGGATGATATATATGATGCAAAACCATGGAGCTTTGATGAATCTTTAGAGCTTTTTTGCTTACATGCATTCAAGCTAAGACATCCTCAAGAGGGGTATGAGAATCTGTCAAAACTAGCAGTTAAATATGCAGGGGGTGTTCCATTAGCTTTAAAAGTTTTGGGTTCAAATCTTTGTTCAAGAAGTACTGATTTTTGGGATAGTGAATTAAACAAAGTTAAGAACTATCCTTATGACCCTATTGAAAATGTGTTGAGAGTGAGCTATGATGGATTAAACCCTTTGGAAAAGGAGATATTTCTAGACATTGCATTCTTTTTCAAAGACGAGAATAAAGATTTTGTGAAAAGGATACTAAATGCATGTGGTTTCTCTGCTACTAGTGGAATAGTTGTCCTTGAAGAAAAAGCTCTTATAACTATTCCAAATGGAGAGAAAATACAAATGCATGACTTGTTACAAGACGGGGGTTTGAATCTAGTTCGTCAACACATAAAAAATCCTAGAAGACGAAGCCGATTGAGGGATATTGAAGAAGTTTCTGATGTACTTCAAATTAAAAAGGGGAGTGATGCATTTGAAGTTGAAGGGATATCATTAGATTTATCACATATTGATGATTTACTTAGCTTGAGTGCTAACACATTCGACATGATGACTAAGTTAAGATTTCTGAAATTGTTTATTCCTTCAGATAAGATATCGGGTAAAGTGATCTATCCTAGACTCTTCAATAAAATCCCTAATAAATTGAGGTGCCTTGAGTGGCACAAATACCCTTTTAAGTCTCTTCCAGCAACTTTTAGTGCAAAGATGCTTGTTGAGATTCGCTTGCCTCATAGTCATGTTGCAGAACTCTGGCAAGGAGTGAAGGATGTTGTGAATTTAGAGGTGATTGATCTAAGTGAATGCAAGCAATTGAAAAATCTCCCAGATTTGTCTAAGGCATTAAGGCTTAAGTGGCTGAATCTCACTAGTTGTGAGAGTTTGTTAGCTGTTCATCCATCTGTTTTATCTCTTGACACACTTGAAACTCTAATACTTGATGACTGCAAAAAACTGAAGAATCTAATATGCAAGAAGCATCTAAGGTGTCTCAAGGAGATTAGTGTCAATGGCTGCACAAGTCTCAAAGAATTTTCAGTGTCATCCGATGAGATAAAAAAGTTGGATTTAAGCAAAACAAGAATAGAAAAATTGTACTCATCAATTGGATATCTAAGAAAACTTTCGTCGTTAAATCTCGAGTGTTCAAGACTAAAAGATCTTCCTAATGAGTTATCTTCTCTAGGATCTCTTATGGACCTTAGGATTTCTAATTGCAGACTAGTATTGAACAAACAGAAGCTACATGTCCTATTTGATGGCTTAAGGAATCTAAGAGAACTATATTTCAAGAATTGTTGCAACTTAACAGAACTCCCTGCAAATATAAGTGGCTTATCACAATTATACAAACTAAGGCTAGATGGAAGCAGTGTGGAGATATTGCCCTCAAGCATCAAGGATCTTGGCAATTTGGAAATTCTATCCTTAAAGAATTGTGTGAAGCTTTGTCGGCTACCCGAACTTCCACCATGTGTGAAAGAGCTTAATGTCATTAACTGCAGGTCATTGGTGACAGTATCGACTTTAAAGACTTTCGCGGTTGCGATGAAAGGGAAGGAAAAATATTTTTCATTCCAGAATTGCGTACAAAGGGATGCACACACACTCCATTCCATTATGGAAGGTAGTCACTTATCAATGAAGAGTTCAGTGTTTCAAAATGTATTTGTAAGAAAACTCGGCGTAGAGAAGCATGGCTACAATTATAACTTCATGAAAGTTTCCTTGCCAGGAAGTAGAATACCAGAGTGTTTTACATATAGAACAACACAGTCCTCATTTCATGTTTATCTCCCTTCCAATTCCAACTTGTTAGGTTTGGTTTTGTGTGCAGTTCTTTCTCCCTCTCCAATGATAAAGAAGCATGGTGCTAAGATCTTTTGTCAATTCTATCTAGATGGTAAAAAGCTTGGATATGCTACTAGATGGTATCATAAAGCTGTTAGAGAGTTGAATTATGATCATGTTTATATGTGGTATGATCCACTCCATTTTGACAGCATAGTCAGAAATCATGAACAATACTTGTCTGTTGAGTTCTATGTAACCGATGATCCGGGAAATCGTGATGCAATGAAGATATGCACCAAAGAGTGTGGAATCCACTTCATATTTGACTCAGACTTAAACAGTTTCATACAAGAGTTGGACATGGATATAAGGTCCAAGCAGAGCTTAGCATTAGAACTTTCCAAGGAATTGGATATTGAGTTGGAACCAGAGCTGTTATTGGAGTTTCAACCACAAGATTGA 2946 0.3598 MSGWDSRIYENDSQVIKKIVNDVLKKLFLRYPTELKVKGLVGIDKMCEDIQFLLSKNKPNQSPKNVEAIGIWGMGGIGKTTIARDVFSKLFPLYDSVCFLENIRELSKKDQPSKLRALSNTLLSELLKEESPKFNPSGSTFIARRLSSKKVFIVLDDVDSSNQLDMLLEVCEYAAPGSKLIITTRNTKLLDGRVDKDDIYDAKPWSFDESLELFCLHAFKLRHPQEGYENLSKLAVKYAGGVPLALKVLGSNLCSRSTDFWDSELNKVKNYPYDPIENVLRVSYDGLNPLEKEIFLDIAFFFKDENKDFVKRILNACGFSATSGIVVLEEKALITIPNGEKIQMHDLLQDGGLNLVRQHIKNPRRRSRLRDIEEVSDVLQIKKGSDAFEVEGISLDLSHIDDLLSLSANTFDMMTKLRFLKLFIPSDKISGKVIYPRLFNKIPNKLRCLEWHKYPFKSLPATFSAKMLVEIRLPHSHVAELWQGVKDVVNLEVIDLSECKQLKNLPDLSKALRLKWLNLTSCESLLAVHPSVLSLDTLETLILDDCKKLKNLICKKHLRCLKEISVNGCTSLKEFSVSSDEIKKLDLSKTRIEKLYSSIGYLRKLSSLNLECSRLKDLPNELSSLGSLMDLRISNCRLVLNKQKLHVLFDGLRNLRELYFKNCCNLTELPANISGLSQLYKLRLDGSSVEILPSSIKDLGNLEILSLKNCVKLCRLPELPPCVKELNVINCRSLVTVSTLKTFAVAMKGKEKYFSFQNCVQRDAHTLHSIMEGSHLSMKSSVFQNVFVRKLGVEKHGYNYNFMKVSLPGSRIPECFTYRTTQSSFHVYLPSNSNLLGLVLCAVLSPSPMIKKHGAKIFCQFYLDGKKLGYATRWYHKAVRELNYDHVYMWYDPLHFDSIVRNHEQYLSVEFYVTDDPGNRDAMKICTKECGIHFIFDSDLNSFIQELDMDIRSKQSLALELSKELDIELEPELLLEFQPQD* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0843 981 Pfam NB-ARC domain 65 274 IPR002182 GO:0043531
Lan20g0843 981 Pfam C-JID domain 807 940 IPR045344 -
Lan20g0843 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 298 IPR027417 -
Lan20g0843 981 Gene3D - 206 288 IPR042197 -
Lan20g0843 981 Gene3D Ribonuclease Inhibitor 581 746 IPR032675 -
Lan20g0843 981 Gene3D Ribonuclease Inhibitor 391 580 IPR032675 -
Lan20g0843 981 SUPERFAMILY L domain-like 401 718 - -
Lan20g0843 981 SUPERFAMILY "Winged helix" DNA-binding domain 275 359 IPR036390 -
Lan20g0843 981 PRINTS Disease resistance protein signature 68 83 - -
Lan20g0843 981 PRINTS Disease resistance protein signature 145 159 - -
Lan20g0843 981 PRINTS Disease resistance protein signature 239 253 - -
Lan20g0843 981 PRINTS Disease resistance protein signature 486 502 - -
Lan20g0843 981 Gene3D - 20 196 IPR027417 -
Lan20g0843 981 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 818 IPR044974 GO:0006952
Lan20g0843 981 PANTHER NB-ARC DOMAIN PROTEIN 2 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0843 Lan-Chr20 7789451 7793854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0843 10 706 WRKY Transcription Factor Family AT4G12020 32.597 1.69e-76 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0843 - - ahf:112709325 1073.92