Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0842 ATGTCTATCCCTGAAAAACTTTATGATGTTTTTATCAGCTTCAGGGGTGAGGACACGCGCAGAAACTTCACTAGCCATCTCCATTCTGAACTTAAAGACGCTAACATATGGACATACACAGATAATAACCTTTCTAAAGGACACGAAGTGTGGCCAGCACTTTGTAGTGCAATTCATAGCTCACATATAGCCATTGTTGTTTTCTCTAGAAACTACGCTACATCAAAATGGTGCTTGAAAGAGCTTGTCAAAATACTTGAATGTAGAAGAAGTGGAAAACTTGTAGTAATACCTGTGTTCTATAGAGTGGACCCATCTGATATAAGGTATCAGAAGGGGAGTTATGGGGAAGCATTTGCAAAACATGTGAGAGGTATCAATGACAAAGGTATGGGAGATTATGTTGAAAATGAAAAGCAAGTGTCTCAGTGGAAATCTGCTCTCACTGAAGCTGCAAATATATCTGGATGGGACTCTTGTAGTAGTGAATATAAGAACGATTCTGAACTCATCAAGAAAATTGTCAAAGATGTGGAAGAAAAGAGGAACATAGTGTCCCTTTATGAACTAGGAGGAGAAATAGAAGACCTTGTAGGAATTGACAAATTATGTGAAGATGTGAAATTTTTGCTAGCAAAAGAACAAAAAACAAATTGGTTACTAAAACATGGTCAAGTAATTGGAATTTGGGGAATGGCAGGGATTGGCAAGACTACAATAGCTAAAGCTGTGTTTTGTCAATTATTTCCCCAATATGACAGTGTTTGCTTCTTGTCAAATGTAAGAGAAGAATCGAAACGACTCGGACTAGCAGATTTGCACGATAGGCTTCTTTGTGAGTTACTAAAGGATGAAAATCCCAAGTCCACATTCATTAAGAGGAAGCTCAGTAGTAAAAAAGTTTTCATTGTACTTGATGATGTGGATAGTGCAGATCAAATAGAGGAGTTATGTAGAGAATGTAAATATGCAGGTCCAGATAGTAAACTCATTATAACAACAAGAAATAAGCATTTGCTCGCTGCAAGAATTGATGAGGATTCTATCTATGAGGTCAAAACATGGAGCTTTGACAAATCTATGGAGCTTTTTAGGCTGCATGTATTCAAGGGAAAGTATCATCAAAAGGGTTATGAGGATCTTTCGAAAAGGGTCGTTGAATATGCAGGGGGCCTTCCATTAGCTTTAAAGGTTTTAGGTTCAAATCTTCATTCAAGAACTGCTGAATTTTGGGACAGTGAATTGAGAAAGCTCATCACTGATCCCAATGACAAAATTCAAAATGTGTTACAAGTGAGCTATGATGGATTAAATAGGCTAGAGAAAAAAATATTTCTAGACATAGCGTTCTTTTTCAAAGACGAGCGTGAAGATTTTGCTCTAAGGGTACTGAATGCTTGTGGCTTCCATGCTACTAGTGGAATGAAGGTCCTTGAAGATAAAGCTCTTATAACCATTTCAAATAGAAAGAGAATACAAATACATGACTTGCAACAAGAAATGGGTTTGAAAATAGTTCGTCAAGACATTGAAGATCCTGGAAAGCGCAGTCGGTTAAGGGATATTGAAGAAGTTTCTGATGTACTTGAAAATAAAAAGGGGAGTGATGCAATTGAAGGCATAAAACTAGATCTATCAGAAATTGATGATTTCCATCTGAATGCTGACACATTCAACATGATGACTAATTTAAGATTTCTTATATTGTATGTCCCATTGGGTAAGAGATCAGGAAATGTGGAGTATCCTAGAGTCTTTAATAAGTTTCCTGCTAAGTTGAGGTATCTTGAGTGGCATGGATACCATTTAAACTCTCTTCCACCAACTTTCAATGCTAAGATGCTTGTTGAGATTCGCATGCCATGCAGCAATGTTGTAGAACTTTGGTGGGGTGTGAAGGATGTTCCGAATTTAGTAAGGATTGATTTAACTGAATGCAAACAGTTGAAGAATCTACCAGATTTGTGTAAGGCAACAAAACTTCAATGGGTGAATCTATCTGGTTGTGAAAGTTTGCAAGATGTTCACCCGTCTATTTTATCTCTTGACACTCTTGAAACTTTGATAGTGGACAACTGTAAAAAATTAAAGTGTCTTAAAGGTGAGAAGCATTTAAAATCTCTTCGTACGATTAGTGTGGATGGTTGCACAAATCTCAAGGAATTTGCAGTGTCATCTGATTCAATGACAAAGTTGGATTTAAGAAATACAGGAATTGAAAAGCTCAACTCATCAATTGGGCGTCTAACAAGACTTACATGGCTCAATTTAGAGGGTTTGAGACTTAGGAATCTTCCCAATGAGTTATCTTATGTACAACATCTTAAGGAACTTAGGATTTCTAGTTGCAGACTAGTAATTGACAGACAGAAGCTACATGTCCTATTTGACGGCTTAAGAACTCTACAAAAACTGCATTTGAAGGATTGTTGTAACTTGCTTGAACTCCCTGATAACATCAACAACTTGTCACACTTATATGAGCTAAGACTAGATGGAAGCAGTGTGAAGATGTTGCCTGAAAGCATCAGGCATCTTAAAAATCTTGAAATTCTGTCCTTAAAGGGTTGCATGAAGCTTCAGAGTCTACCAGAGCTTCCACTAATTATTAAAGAGTTTAATGCTGTTAACTGCGGGTCATTGGTGACAGTATCCACTTTAAACACTTTTGGAAAACACATGATAGGGAAGGACAAATTCATTTCATTCCAGAATTGCAAGAAACTGGATGGATCTTCACTCTGCCGCATTATGGAAGGTGCCCACTTAACAATAATGAAAGCTGTGACTGAGAATATATATGTAAGAACATATGGTCTTAAAGTCCATAGCTATAATTATACCTCCATAAAGGTTTGTTTTCCAGGAAGCAAAGTTCCCGAGCAGTTTACATTGCAAACAAGAGACTCCTCAATTCCTATTAAATTTCCTTCTGATTCCAAGTACCTAGGCATAGTTTTGTGTGCGGTTCTTTCTCCGTTCGAGGGAATGAAGAAGAATGGTGCTAAAATCTATTGCCAATGCTACTTGGCAGATGGTAGAAAGCTGGGATACGCATCTGCATGGCATCATAAAGCTATCCCTGACTTGAATTCTGATCATGTGTTTATGTGGTATGATGCATTCCACTTCGACAGCATTTTCAGAAGTTATGAAACACAGGTTTCTTTTATGTTCTATCTTACAATTACAAATGATAAGGGGGAACGTGAGGTCTTGAACCTTGGCACCAAAGAGTGTGGGGTTTGCCTAATATTTGATCCACAATCACAACATAGTGCAACCATAACAGAACTTGAAACATCTGATGAGAATAGATGCAATGAAGTAAGGAATCAAGAACTGGGGTCTTGGTTGAGGCACTCTTTCTACTTAGGCCTCTGTTTGGGCACATTCCTTTGCGCTGCTTCGGTAGTGGCAAAATCAAGACACCTTATATGA 3441 0.3775 MSIPEKLYDVFISFRGEDTRRNFTSHLHSELKDANIWTYTDNNLSKGHEVWPALCSAIHSSHIAIVVFSRNYATSKWCLKELVKILECRRSGKLVVIPVFYRVDPSDIRYQKGSYGEAFAKHVRGINDKGMGDYVENEKQVSQWKSALTEAANISGWDSCSSEYKNDSELIKKIVKDVEEKRNIVSLYELGGEIEDLVGIDKLCEDVKFLLAKEQKTNWLLKHGQVIGIWGMAGIGKTTIAKAVFCQLFPQYDSVCFLSNVREESKRLGLADLHDRLLCELLKDENPKSTFIKRKLSSKKVFIVLDDVDSADQIEELCRECKYAGPDSKLIITTRNKHLLAARIDEDSIYEVKTWSFDKSMELFRLHVFKGKYHQKGYEDLSKRVVEYAGGLPLALKVLGSNLHSRTAEFWDSELRKLITDPNDKIQNVLQVSYDGLNRLEKKIFLDIAFFFKDEREDFALRVLNACGFHATSGMKVLEDKALITISNRKRIQIHDLQQEMGLKIVRQDIEDPGKRSRLRDIEEVSDVLENKKGSDAIEGIKLDLSEIDDFHLNADTFNMMTNLRFLILYVPLGKRSGNVEYPRVFNKFPAKLRYLEWHGYHLNSLPPTFNAKMLVEIRMPCSNVVELWWGVKDVPNLVRIDLTECKQLKNLPDLCKATKLQWVNLSGCESLQDVHPSILSLDTLETLIVDNCKKLKCLKGEKHLKSLRTISVDGCTNLKEFAVSSDSMTKLDLRNTGIEKLNSSIGRLTRLTWLNLEGLRLRNLPNELSYVQHLKELRISSCRLVIDRQKLHVLFDGLRTLQKLHLKDCCNLLELPDNINNLSHLYELRLDGSSVKMLPESIRHLKNLEILSLKGCMKLQSLPELPLIIKEFNAVNCGSLVTVSTLNTFGKHMIGKDKFISFQNCKKLDGSSLCRIMEGAHLTIMKAVTENIYVRTYGLKVHSYNYTSIKVCFPGSKVPEQFTLQTRDSSIPIKFPSDSKYLGIVLCAVLSPFEGMKKNGAKIYCQCYLADGRKLGYASAWHHKAIPDLNSDHVFMWYDAFHFDSIFRSYETQVSFMFYLTITNDKGEREVLNLGTKECGVCLIFDPQSQHSATITELETSDENRCNEVRNQELGSWLRHSFYLGLCLGTFLCAASVVAKSRHLI* 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0842 1146 ProSiteProfiles TIR domain profile. 6 182 IPR000157 GO:0007165
Lan20g0842 1146 PRINTS Disease resistance protein signature 226 241 - -
Lan20g0842 1146 PRINTS Disease resistance protein signature 295 309 - -
Lan20g0842 1146 PRINTS Disease resistance protein signature 389 403 - -
Lan20g0842 1146 PRINTS Disease resistance protein signature 844 860 - -
Lan20g0842 1146 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 967 IPR044974 GO:0006952
Lan20g0842 1146 Pfam TIR domain 8 183 IPR000157 GO:0007165
Lan20g0842 1146 Pfam C-JID domain 954 1087 IPR045344 -
Lan20g0842 1146 Gene3D - 192 346 IPR027417 -
Lan20g0842 1146 PANTHER NB-ARC DOMAIN PROTEIN 12 967 - -
Lan20g0842 1146 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 157 IPR035897 -
Lan20g0842 1146 Gene3D - 5 186 IPR035897 -
Lan20g0842 1146 SMART till_3 7 154 IPR000157 GO:0007165
Lan20g0842 1146 SUPERFAMILY L domain-like 495 908 - -
Lan20g0842 1146 Pfam NB-ARC domain 217 424 IPR002182 GO:0043531
Lan20g0842 1146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 448 IPR027417 -
Lan20g0842 1146 Gene3D Ribonuclease Inhibitor 728 919 IPR032675 -
Lan20g0842 1146 Gene3D Ribonuclease Inhibitor 514 727 IPR032675 -
Lan20g0842 1146 SMART AAA_5 223 354 IPR003593 -
Lan20g0842 1146 Gene3D - 356 438 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0842 Lan-Chr20 7777231 7785564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0842 6 829 WRKY Transcription Factor Family AT4G12020 31.361 4.67e-93 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0842 - - ccaj:109795381 1245.72