Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0840 ATGTACTTCAAAGTAAACCAGTGCACAAAAAGAAAGTTTCAAGTGGTATGTTACAGAATGAGAGCTAAAAGTTGGATAAGTAAGAGGAAATTTAGCATTAGAGGGAAGCTGAGAAAGATGAGTAAGTGTATATGTTCTTCCATGGAACAGTTTAAGGTTATTGATGATATAAGTTCTTCATCAGAGTCATTGGCAACCAAAGACTACTCGGCGAGTGGTGGTTATTCCTCCCATCCTGGTGAAACAGAAACAAAGGTGGAAAATAGAAACATTGAAGAAGCAGAATCGTCTCTTCGCGAAAGTGGTTATTTAAACTACGAGGAAGCTAGAGCACTATTAGGAAGACTGGAGTATCAGAAAGGTAACATTGAAGCTGCACTTCATGTATTTGAAGGAATAGATATTGATGCTGTTATTCCGAAGATGAAATTTTCCATATCTAGAAGACATGCATCCAATAGATTCCTTTCCCAAAGTGATGCAATGCCTCCTATGTCAATTCATGCTGTTAGTTTACTTCTTGAAGCTGTTTTTCTCAAGGCAAAATCATTGCAGACTCTTGGATGGTTTCAAGGTTCTGCTCAATCATGCAAAACTATTCTAGACACTGTTGAATCAGCATTGCCAGAAGGTTTGCCTGAAAACTTTGTTTCAGACAGTAAATTACACGAGACTGTAACAAATGCGGTAGAACTGCTTCCAGAGTTGTGGAAACTTGCTGGTTCTCCTCAAGATGTCATCGCGTCATATAGGCGTTCACTGCTTTATCACTGGAATCTTGACACTGAAACCATTTCAAGAATACAAAAGGACTTTGCTTTGTTTCTTTTGTACGGTGGTTGCGAAGCATGCCCTCCATCTCTACGCTCTCACTTGGATGGTTCGTATGTTCCAATAAACAATATAGAAGAAGCTGTTCTTCTGCTTCTGATTCTGCTAAGAAAATCTGCTCTTGGAAGCATTGTTTGGGACCCTTCAATAATTGATCACCTTTCTTTTGCTCTAAGTGTTTCGGGTGAATTCATGACTCTGGCTAAACATATAGAGGAATTGCTTCCAGAAGCAATGGAGAGAAAAGACAAATATTATACACTAGCTCTTTGTTACTGTGGAGAAGGTAATCATATGATTGCTTTGGATCTTTTGAGGAACTTTTTGAATAATAGAGAGAACTCGGACACCATACAAGAATTACTTCTAGCTTCAAAAATTTGTGGAGACAACATGGTTTGTGTTGAAGATGGAATCAAATATGCTATCAAAGTCATTTCTCAATTGCATGGAAAATGCATGCAGATGTTAGCTATTGCAAATTGCATACTAGGTGTTCTACTGTCCTCAAAATCGAGGTTAATTGGTTTTGAATCAGAGAAGGTTTTGATGCAGTCTGAAGCACTCAATGCTCTAGAAACTGCTGAGAGAATGATGAGGGAAAGTGATCCATACATTGTCCTTAATCTTTGTTTAGAATATGCTGAGCAGAGGAAGTTGAGCATTGCTTTTTATCATGCAAAGAAACTGGTTGCCCTCGAAGGTATTACCGGATATATACTACTGGCACGGATTTTATCGGCTCAAAAGAATTTTGTAGATGCAGAGATTGTTATTGATGCTGCTATAGATCAAAGTGGAAAATGGGAACAAGGAGTGTTGTTGAGAACTAAAGCTAAACTACGTATCGCGCAGGGAAAATTAAAGAATGCAATTGAGACATATACTTTTCTTCTTGCTGTTCTTCAAGTACAGAAAAAAAATTCAGTTATTTCAAGTAAGGTTCTGAAGAATAAGGGAAACTGCGACAGAAGACTGGAAATGGAAATTTGGCACGATTTAGCCAACGTGTACATAGCATTATCACAGTGGCAGGATGCCGAAGTTTGTCTTTCAAAATCTCAAGCCATTAATCCCTATTCTGCTTCTAGATGGCATTCCACAGGCCTACTTTTTGAAGCCAGAGGACTTCATCAAGAAGCTATGAAATCATTTAGAAAAGCATTAGATATTGATCCCAACCATGTCCCAAGTTTGATATGCACTGCTGGTGTTATGAGACATCTTGGTTGTCAATCATCTTCAATTGTTAGAAGCCTTCTCACTGATGCACTATGGCTTGACAGAACAAACCCATCTACTTGGTACAATCTTGGATTGTTATACAAAGATGATTTCGGGATATCGTCGCCGGAAGCTGCTGAATGCTTTCAGGCTGCGGCTTTTCTTGAAGAATGTTCTCCCATTGAACCCTTTAGATAG 2253 0.3866 MYFKVNQCTKRKFQVVCYRMRAKSWISKRKFSIRGKLRKMSKCICSSMEQFKVIDDISSSSESLATKDYSASGGYSSHPGETETKVENRNIEEAESSLRESGYLNYEEARALLGRLEYQKGNIEAALHVFEGIDIDAVIPKMKFSISRRHASNRFLSQSDAMPPMSIHAVSLLLEAVFLKAKSLQTLGWFQGSAQSCKTILDTVESALPEGLPENFVSDSKLHETVTNAVELLPELWKLAGSPQDVIASYRRSLLYHWNLDTETISRIQKDFALFLLYGGCEACPPSLRSHLDGSYVPINNIEEAVLLLLILLRKSALGSIVWDPSIIDHLSFALSVSGEFMTLAKHIEELLPEAMERKDKYYTLALCYCGEGNHMIALDLLRNFLNNRENSDTIQELLLASKICGDNMVCVEDGIKYAIKVISQLHGKCMQMLAIANCILGVLLSSKSRLIGFESEKVLMQSEALNALETAERMMRESDPYIVLNLCLEYAEQRKLSIAFYHAKKLVALEGITGYILLARILSAQKNFVDAEIVIDAAIDQSGKWEQGVLLRTKAKLRIAQGKLKNAIETYTFLLAVLQVQKKNSVISSKVLKNKGNCDRRLEMEIWHDLANVYIALSQWQDAEVCLSKSQAINPYSASRWHSTGLLFEARGLHQEAMKSFRKALDIDPNHVPSLICTAGVMRHLGCQSSSIVRSLLTDALWLDRTNPSTWYNLGLLYKDDFGISSPEAAECFQAAAFLEECSPIEPFR* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0840 750 PANTHER PROTEIN NPG1 32 750 IPR043376 -
Lan20g0840 750 PANTHER OS10G0471400 PROTEIN 32 750 - -
Lan20g0840 750 SUPERFAMILY TPR-like 516 721 IPR011990 GO:0005515
Lan20g0840 750 ProSiteProfiles TPR repeat profile. 639 672 IPR019734 GO:0005515
Lan20g0840 750 MobiDBLite consensus disorder prediction 68 92 - -
Lan20g0840 750 Pfam Tetratricopeptide repeat 642 672 IPR019734 GO:0005515
Lan20g0840 750 Gene3D Tetratricopeptide repeat domain 300 605 IPR011990 GO:0005515
Lan20g0840 750 Gene3D Tetratricopeptide repeat domain 606 745 IPR011990 GO:0005515
Lan20g0840 750 SMART tpr_5 513 546 IPR019734 GO:0005515
Lan20g0840 750 SMART tpr_5 639 672 IPR019734 GO:0005515
Lan20g0840 750 SMART tpr_5 605 638 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0840 Lan-Chr20 7767896 7772139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0840 33 750 Calmodulin-binding Proteins AT4G28600 52.103 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0840 K21843 - gmx:100789469 1110.13