Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0831 ATGGTTTTCAAGTATATTCGTCTCAAACTCAAGGCATTCAGGTTGAAACGTTTTCTTGTAAGAAAAAATGGAGGCAGAAAGAGAAAGCACGTGTGTGCAAAGAAACCTTCATGGATGATGCCAATAACACATGGTTATTATGTTGTGGAACAACATATGATTAGAGATGATTGTTCTGATGACTCAGATTTTGATTCTGTTGTGATACAAAGAGAGCAGATAAATGACACAGAATTGTGGTATTTTGGAATCTTTGATGTACTAATTGGAGACATGGTTACCAAGTACATGCAATCCCATTTCTTTGACAAGAAGCTTAAAGAGTCTCATATGAGGAGTAAAGGCAAGAAAACACTGAAGAGAGCATACCTTGGTGCAAGGGCAAAGATAAGAGATGAACATGATTCAGAAGAAACAAGCAGAATGGGATCAACATCTGTTATGGTGATCAATGGAGAAAAACTTGTAATAGCAAACATGGGAGATTACAGAACTGTTGTTTGCAGAGATGGTATAGCTTATCAAGCAACAGGGAGATACCAAGAATCAGCCAAAAGACATTGGTCTCAAAGAATATTTTCAGTACACATGCTAGGATGTGAATCAGAAAATGTAGCAGATACAAGGCATTCTAGAGGCTCAGAACTTGTTGTCAGAGATGAAAGGGTTGATTCTGATACTGAATTTGTGATATTAGCAAGCAATGGTATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATTTGATTAGTCACATAGAAGATCCACAAGAAGCAGCTGAATGTTTGGCAAAGGAAGCTTTGATTAGGATGAGTAGAAGCAGCATCTCATGCTTAATCATTCGATTTGACTAA 855 0.3766 MVFKYIRLKLKAFRLKRFLVRKNGGRKRKHVCAKKPSWMMPITHGYYVVEQHMIRDDCSDDSDFDSVVIQREQINDTELWYFGIFDVLIGDMVTKYMQSHFFDKKLKESHMRSKGKKTLKRAYLGARAKIRDEHDSEETSRMGSTSVMVINGEKLVIANMGDYRTVVCRDGIAYQATGRYQESAKRHWSQRIFSVHMLGCESENVADTRHSRGSELVVRDERVDSDTEFVILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMSRSSISCLIIRFD* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0831 284 CDD PP2Cc 81 283 IPR001932 -
Lan20g0831 284 Pfam Protein phosphatase 2C 80 175 IPR001932 -
Lan20g0831 284 Pfam Protein phosphatase 2C 223 274 IPR001932 -
Lan20g0831 284 SMART PP2C_4 51 281 IPR001932 -
Lan20g0831 284 ProSiteProfiles PPM-type phosphatase domain profile. 61 283 IPR001932 -
Lan20g0831 284 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 283 - -
Lan20g0831 284 Gene3D - 47 284 IPR036457 -
Lan20g0831 284 SUPERFAMILY PP2C-like 67 284 IPR036457 -
Lan20g0831 284 PANTHER ALPHABET, ISOFORM E-RELATED 6 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0831 Lan-Chr20 7639982 7641933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0831 1 283 PP2C-type Phosphatase Gene Family AT3G23360 48.592 9.99e-86 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0831 K19704 - gmx:100794054 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0831 20 7639982 7641933 Lan4g1252 4 20844166 20848541 LSH