Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0824 ATGGCTGAACCCTCCTCGACATTTAATGTTGAGGGACAACAACCTACCCCTCTAATAAAAATGATCGCGGTGGCGTCTATGGCCGCCGGTGTTCAATTCGGGTGGGCCTTACAGCTATCACTTTTAACCCCATATGTCCAGCTATTGGGTGTCCCACACGCTTGGTCGTCTGTTATATGGCTTTGTGGCCCAATATCTGGTCTCCTAGTTCAACCCACGGTGGGATACTACAGCGATCGGTGCAAGTCACGCTTCGGTCGCCGTCGTCCTTTCATCCTAGCGGGTGCTATTTTCGTCGCCATCTCCATAATACTCATTGGATTTGCGGCGGATTTCGGCTATAGCATGGGGGATGACCTCACCAAGAAGACTAGACCACATGCGGTGGGCTTCTTTGTTGTTGGATTCTGGATCCTAGATATGGCCAACAACATGCTCCAGGGACCTTGTCGGGCCTTCCTTGGAGATCTCTCTGGGGGAGACCAGCTAAAAATTCGTACTGGAAATTCTGCTTTCTCTTTCTTCATGGCTATCGGGAGTATCCTTGGATATGCTGTTGGGTCCTACAGCAAGCTTTACAAGGCATTCCCTTTCACGGAAACCAAGGCATGTGATATTTATTGTGCAAATCTCAAGAGTTGCTTTTTCATCGCTATTGCACTCCTACTCGTACTGGTGATCATTGCATGTGTCTACGTCAAGGAAATACCCTTGACATCAATAGACACTACTGATGACGAGGACGAAGTAAAGACTCCGTCATTCAGGGAAATGAAGCGCCCAATGTGGATGCTATTAATAGTGACATTCCTGAATTGGTTCGCATGGTTTCCATGGGTCCTTTACGACACAGATTGGATGGGTCGTGAGGTGTATGGTGGTACTGTTGGAGATAGCCTATTTGATAAGGGTGTTCATGATGGTTCATTGGGTCTCATGTTAAACTCAATTGTTCTGGCGGTGATGTCAGTGGCCATTGAACCATTATCTCGTGTTCTTGGAGGAGTGAAGAGACTATGGGGATTGGTGAACTTTATTCTAGCCATTTGTTTAGCAATGACAGTCCTCATTTCAAAGGAGGCTAGGGCTCACCGTCATTTCTTGTTGAGTACCGGTGCAAAAGATAATGGTCCACCACCTAATGTTAGGGGTGGTGCTTTGGCTTTGTTCTCTGTTCTTGGCATTCCCCTTGCGATCACTTACAGTGTACCATTTGCGCTAGCATCCATTTACTCCAGCACCTCAGGGGCAGGCCAAGGTTTATCTCTGGGAACTCTAAATCTTGCAATCGTCATTCCACAGATGTTGGTATCCGCTATAGGTGGAAAAATTGACGAGGCACTTGGGGCAGGGAACTTGCCGGCGTTCGTGATGGGTGCAATAGCCGCCGCCATCAGTGCCGTATTGGCATTTGTATTGCTTCCAACTCCTAAGCCAAAAGATATGGACACGTCTGCAACAGTTGCGGGAGCTTTTCATTGA 1482 0.4777 MAEPSSTFNVEGQQPTPLIKMIAVASMAAGVQFGWALQLSLLTPYVQLLGVPHAWSSVIWLCGPISGLLVQPTVGYYSDRCKSRFGRRRPFILAGAIFVAISIILIGFAADFGYSMGDDLTKKTRPHAVGFFVVGFWILDMANNMLQGPCRAFLGDLSGGDQLKIRTGNSAFSFFMAIGSILGYAVGSYSKLYKAFPFTETKACDIYCANLKSCFFIAIALLLVLVIIACVYVKEIPLTSIDTTDDEDEVKTPSFREMKRPMWMLLIVTFLNWFAWFPWVLYDTDWMGREVYGGTVGDSLFDKGVHDGSLGLMLNSIVLAVMSVAIEPLSRVLGGVKRLWGLVNFILAICLAMTVLISKEARAHRHFLLSTGAKDNGPPPNVRGGALALFSVLGIPLAITYSVPFALASIYSSTSGAGQGLSLGTLNLAIVIPQMLVSAIGGKIDEALGAGNLPAFVMGAIAAAISAVLAFVLLPTPKPKDMDTSATVAGAFH* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0824 493 Pfam MFS/sugar transport protein 25 275 - -
Lan20g0824 493 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 12 481 - -
Lan20g0824 493 CDD MFS_SLC45_SUC 21 471 - -
Lan20g0824 493 Gene3D MFS general substrate transporter like domains 19 478 IPR036259 -
Lan20g0824 493 TIGRFAM GPH_sucrose: sucrose/H+ symporter 17 479 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lan20g0824 493 SUPERFAMILY MFS general substrate transporter 22 481 IPR036259 -
Lan20g0824 493 PANTHER SUGAR TRANSPORTER 12 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0824 Lan-Chr20 7475658 7478694 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0824 11 493 Sucrose Transporter Gene Family AT1G22710 61.569 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0824 K15378 - gmx:100782007 635.565