Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0821 ATGACTGAACCCTCTTCAGCCTTAAATGTTGAGGGACAGGTTCCACCACCTACCCCTCTCATAAAGTTAATAGCCGTGGCCTCTATTGCCGCAGGTGTTCAATTTGGATGGGCCCTACAACTCTCACTCTTGACCCCATATGTCCAGCTATTGGGTGTCCCACACGCTTGGTCCTCCGTTATCTGGCTTTGTGGCCCAATTTCTGGTCTCGTTGTTCAACCCACCGTTGGTTACTACAGTGATCGTTGCACATCCCGCTTCGGTCGCCGTCGTCCTTTCATCTTAGCCGGTGCTATTGCCGTCGCCATCTCCATTGTCCTCATCGGATTCGCGGCGGATTTTGGCTATAGCATGGGCGATGACCTCAACAAGAAGACTAGACCACGTGCCGTGGGCTTCTTTGTTGTTGGATTTTGGATTCTTGATATGGCCAATAACATGCTCCAGGGGCCTTGTCGGGCCTTCCTCGGAGATCTATCAGGAGGAGACCAACTCAAGATCCGTACTGGAAATTCTGCTTTCTCTTTCTTCATGGCTATCGGGAGTATCCTTGGATATGCTGCTGGGTCCTACAGCAAGCTTTACAAGGCGTTCCCTTTCACAAAAACCAAGGCATGCAATGTTTATTGTGCAAATCTCAAGAGTTGCTTTTTCATCGCTATTGCACTCCTGCTCGTACTCGTCATCATTGCATGTCTCTACGTCAAGGAAATACCCTTGACATCAATAGACATTATTGATGACGAGGATGAAGTAAAGACTCCATGTTGGGGACTATTTTTCGGCGCATTCAGGGAAATGAAGCGCCCAATGTGGATGTTATTAATAGTGACATTCCTGAATTGGTTCGCATGGTTTCCATGGGTCCTTTACGACACAGATTGGATGGGTCGTGAGGTGTATGGTGGTACTGTTGGAGATAGCCTATTTGATAAGGGTGTTCATGATGGTTCATTGGGTCTCATGTTAAACTCAATTGTTCTGGCGGTGATGTCAGTGGCCATTGAACCATTATCTCGTGTTCTTGGAGGAGTGAAGAGACTATGGGGATTGGTGAACTTTATTCTAGCCATTTGTTTAGCAATGACAGTCCTCATTTCAAAGGAGGCTAGGGCTCACCGTCATTTCTTGTTGAGTACCGGTGCAAAAGATAATGGTCCACCACCTAATGTTAGGGGTGGTGCTTTGGCTTTGTTCTCTATTCTTGGCATTCCCCTTGCGATCACTTACAGTGTACCATTTGCTCTAGCATCCATATACTCCAGCACCTCGGGGGCAGGCCAAGGTTTATCTCTGGGGACTCTCAATCTGGCAATTGTTATTCCACAGATGTTGGTGTCAGCAATAGGTGGAAAAATAGATGAGGCATTTGGCGCAGGGAACTTGCCGGCGTTCGTGATGGGTGCAATAGCCGCCGCCATCAGCGCCGTATTGGCATTTGTATTGCTTCCAACTCCTAAGCCACAAGATGTGGCCAAGGCTGCACCAGTTGTTGGAGGCTTTCATTGA 1509 0.4798 MTEPSSALNVEGQVPPPTPLIKLIAVASIAAGVQFGWALQLSLLTPYVQLLGVPHAWSSVIWLCGPISGLVVQPTVGYYSDRCTSRFGRRRPFILAGAIAVAISIVLIGFAADFGYSMGDDLNKKTRPRAVGFFVVGFWILDMANNMLQGPCRAFLGDLSGGDQLKIRTGNSAFSFFMAIGSILGYAAGSYSKLYKAFPFTKTKACNVYCANLKSCFFIAIALLLVLVIIACLYVKEIPLTSIDIIDDEDEVKTPCWGLFFGAFREMKRPMWMLLIVTFLNWFAWFPWVLYDTDWMGREVYGGTVGDSLFDKGVHDGSLGLMLNSIVLAVMSVAIEPLSRVLGGVKRLWGLVNFILAICLAMTVLISKEARAHRHFLLSTGAKDNGPPPNVRGGALALFSILGIPLAITYSVPFALASIYSSTSGAGQGLSLGTLNLAIVIPQMLVSAIGGKIDEAFGAGNLPAFVMGAIAAAISAVLAFVLLPTPKPQDVAKAAPVVGGFH* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0821 502 Gene3D MFS general substrate transporter like domains 22 488 IPR036259 -
Lan20g0821 502 CDD MFS_SLC45_SUC 23 480 - -
Lan20g0821 502 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 12 491 - -
Lan20g0821 502 Pfam MFS/sugar transport protein 28 285 - -
Lan20g0821 502 SUPERFAMILY MFS general substrate transporter 23 489 IPR036259 -
Lan20g0821 502 TIGRFAM GPH_sucrose: sucrose/H+ symporter 19 488 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lan20g0821 502 PANTHER SUGAR TRANSPORTER 12 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0821 Lan-Chr20 7355661 7358327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0821 5 502 Sucrose Transporter Gene Family AT1G22710 62.451 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0821 K15378 - gmx:100782007 650.588