Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0794 ATGGCCATTGATAGTTCATCCATGAATGTGCCATTGCTACATGAGCAAGCACACCATATAGATGAGGAGAAAGAGCTTTTTGGTGAAGATTCATCATCTACTACCACAAACACTGTCACCTTCTTTCGCACCTGTCTTAATGGAATCAACGCATTATCAGGAGTTGGAATTCTCTCGGTTCCATATGCACTCGCATCAGGAGGATGGCTAAGCTTAATTCTTCTCTTTGTTATTTCCATGGTAACCTTTTACTCCGGGATATTGATTAAAAGATGTATGGATATGAATTGCAAAATTAGAACCTTTCCAAATATAGGAGAGGCAGCATTTGGAAAGATAGGAAGACTATTAGTACAAGCAACCATGTACACTGAGCTCTACATAGTTGCAGCAGAGTTCTTGATTCTAGAGGGTGATAACTTGCATAATTTATTCCCGAATACTGAGATTAAAATAGCTGGCTTAGAAGTTGGTGGAAAACAGCTTTTTGTGATATTGGCTTGTCTTGTGATTATGCCTACTGTGTGGTTGGATGATTTGAGCCTCCTTTCTTATATCTCTGCAAGTGGGGTACTAGCTTCTGTTATCTTCATCTTCTCGGTATTCTTCACTGCAACACTTGAGGAATCAATTGGATATCATGGAAATTGGACTCTTCTCAATTGGAATGGGGTTCCTACAGCTGCTAGCTTGTATGCATTTTGTTACTGTGCACACCCAGTGTTTCCCAGCCTCTATAATTCCATGAGAAACAAACACCAGTTTTCCTATGTTCTTCTTGTTTGCTTTGTAGTGAGCACTGCAGGGTATGCATTCATTGCTATAATAGGTTACCTAATGTATGGCGCAGAGGTTGAATCACAGATAACTTTAAACCTGCCCAAAAACAAAATAATGTCACAGGTAGCAATATATACTACCCTGGTGAATCCCATAGCCAAGTATGCTTTGATGGTGACACCAATTACCAATGCTTTAAAAGGCTTGCTTCCGAAAGAACAAAAGAATAGGCTCACTAGTGTCTTAATAAGCACTACTTTGGTAATCAGCACTGTAATTGTTGCACTAACAGTTCCATTCTTTGCATATCTCACATCACTGGTTGGAGCTTTCCTAAGTATTACAGCTTCAATTATACTTCCATGCTCCTGCTACTTGAAGATTTCTGGCACTTATAACAAATTTGGGATTGAAACAGTGGCCATAGCTACAATAATATTACTAGGTTTGGTTATAGGAATTTTTGGTACTTGGATATCACTTGTACAAATAATAGAGCATTTGTAA 1287 0.3869 MAIDSSSMNVPLLHEQAHHIDEEKELFGEDSSSTTTNTVTFFRTCLNGINALSGVGILSVPYALASGGWLSLILLFVISMVTFYSGILIKRCMDMNCKIRTFPNIGEAAFGKIGRLLVQATMYTELYIVAAEFLILEGDNLHNLFPNTEIKIAGLEVGGKQLFVILACLVIMPTVWLDDLSLLSYISASGVLASVIFIFSVFFTATLEESIGYHGNWTLLNWNGVPTAASLYAFCYCAHPVFPSLYNSMRNKHQFSYVLLVCFVVSTAGYAFIAIIGYLMYGAEVESQITLNLPKNKIMSQVAIYTTLVNPIAKYALMVTPITNALKGLLPKEQKNRLTSVLISTTLVISTVIVALTVPFFAYLTSLVGAFLSITASIILPCSCYLKISGTYNKFGIETVAIATIILLGLVIGIFGTWISLVQIIEHL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0794 428 PANTHER AMINO ACID TRANSPORTER AVT1J 35 425 - -
Lan20g0794 428 Pfam Transmembrane amino acid transporter protein 38 420 IPR013057 -
Lan20g0794 428 PANTHER OS05G0424000 PROTEIN-RELATED 35 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0794 Lan-Chr20 6899152 6901513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0794 20 425 Amino Acid or Auxin Permease AAAP Family AT3G28960 52.334 3.59e-151 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0794 K15015 - gmx:100794374 568.155