Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0781 ATGGCAATGGTTGAGTCTCTTACTCTGAGGAATAAGCTCAAGGCTCTTTGTACTTGTTTAGAAGATGGTTGGTCTTATGCTGTATTCTGGCGCTTTCATCCACATAATCCATTGTTGTTGACTGCTGAAGATGCATACTATGAAGGACAATTGGGACAAGAGATTGCCAACATGCTTCCACAGACTCACTTGTTTGGAGAAGGAATTGTTGGTAAAGCAGCTTTTACTGGCAAGCACATATGGGTACACTCAGATGGTCAAAGCCAAGAATGGAATTTGTGTGGCCAGAATATTTACAAGGAGGATTCTGAATTGCTTCAACATTTCTCATCTGGCATAAAGACAATTGTGGCCATACCTGTGATAGCATGTGGAGTGGTACAATTCGGATCCAAAAACAAGATTTTGGAAAGAGTTGAATTTTTGGAGCAAACACAGAGATCACTCATAGAGATGGATAATGTGGGTATGGTTGACATGTTAGGAAATGTAGTTTCACCACTGGATTGTGAAAACTACGACTTAAATAGCTTGCTGGCTTCCTTTTCTTCTGAAAATTCATACGACTCGACCCTCGAATATGCTCATGGTGAAAACTCTGAAGAGCTCATGCGAAAGTTTTATTCTTATGAAAGTGACAACAATTCATTCCCTTCCCTATATAATGTTCACAACGAAGGGATGACTTCATTCCATGGAGATTATTGTGTTGGTGACCAATTGAATGCTATCATTGAAGCTCAAGTTGCATTGTGTGATACAGATTTTACTAATGTGCTTTTGAGGCCTAACTCTTTGATGAACAGCCTAATTGCCAACGACACCAGTTTTGGTGCATGGAATGATGAAGTTTCATTTTTCGATTCGCTTGGGCAGCAATTGGTATCAGCCGAGGAAAACACATTTCCTTGTAGTGAAATTGCAGTTGAGGACCCAGCATTGTCTTCAATGTACAGCATGAACATAGGGGCATGTCAAGAAAAATTGCAAAGCACACTGACCAACCAACAATCTTCTCAATCTGATATTGTGACACAAGTTGATTTCCAATCAAGTTCAAACACACTGCATGGACTCTCTAAGAACATAGAGGCAGTTGATATGTCAGAAGAATTTTTGAACTTCGGCTCCTTGGATGGTCTTTGCCAGTGGTTTGCTCCTTCTCCAGATGATAATAACTTTATAGCAATAACTGCATTGGATAGCAACCTTTCTGAATCAATTGAGTTTAATCCCACTTCTTCTGATTGGGTCGGAAGTAGTTCCTTACGTAATATTCCAGTGACATGCTCAGCAGGAGCTAATTCCATAGAAACATCTGCAATTATGCATAGTCCTGAAAATAGTTTCTTCGATTTCAACCGTGATGAAAAAAATGAATGGTGGGAGAATATGCCTACACCAGCATGGAGTCCTGCTATCTTTTCTGAGTGCGTATCGGAGTTAAACACTAGCACACTTACTGGCATACAGAATGGATTATTATTCTCAGAGCCTTTGAGTGGCGAAGCAAGTTACAATCCTTTGGATAGTTCTAATTTTGAGTATGAGTTATCACCAAATAAAAGGCAAGTGGTAGAATTTGCACAATTGAATACAAATGCAATACAATTTCGAAATCTTGCGAGGCCTGCTAAGGCTACATCAGACTTGATGGACTCCATTTCATACTCGGAGAAGACTAACAATCTTGTAAGGAAGAAAGATACACTCCCAAAATTACAGGTACCTAGATGGATTGATGATGGCCATAGCATTAATAATGGAAAGGCTGTTCCTACACACTGTCAAACTCAAAATCCAGAGGAGGGTACAACAAAGCGCACTAAGAAACGGGCTAGGCCAAAGGAGAGTACTCGGCCGCGACCAAAAGATCGTCAACAGATCCAAGACTGCATTAAAGAGTTGAGAGGGATCATCCCTAATGGTGAAAAGTATAGCATTGATTCATTGTTAGGCCAAACCATCAGTTATATGCGTTACTTAAAAATTGTAGCTGAGTATGCTGACAAGCTACAAGAACCGATCGAGCTGAAGCTTATTGAACAAGCAAATGAAGTGGCTCTAGAAGACAGTAATGTGGAAGATAACAAAAACTTCGGTGTTACATGGGCAGTTGATTTGGCAACTCCAACAATGGAATGTCCAATTATAGTAGAGGACATGAACACGCCCGGCCAAATGCGAATAGAGTTTCTTTGTGAGGGTCAGGAGGGTGTTTTCGGCCTTGGTATAGGTCACAACATCGAGTCTATCGGGCTGAAAACCTTGAAAGCAGAGATGAAAAGTAGGAAGAACAAATTGTGGGCAGTTTTTATTGTTGAGATTGTGCAACAGGCAAATAGACATTGGACAAGGCAAGATGTATTTTATTTCATTCTCAACCTTATACAGCAATCATACACCTCCAAGATTGACTCAGCCAATGACATTGCAAATGTTATTGATCCTATTGATTCTTGGCTTAGAAAATCACCAGAAAAACAGTGA 2490 0.4016 MAMVESLTLRNKLKALCTCLEDGWSYAVFWRFHPHNPLLLTAEDAYYEGQLGQEIANMLPQTHLFGEGIVGKAAFTGKHIWVHSDGQSQEWNLCGQNIYKEDSELLQHFSSGIKTIVAIPVIACGVVQFGSKNKILERVEFLEQTQRSLIEMDNVGMVDMLGNVVSPLDCENYDLNSLLASFSSENSYDSTLEYAHGENSEELMRKFYSYESDNNSFPSLYNVHNEGMTSFHGDYCVGDQLNAIIEAQVALCDTDFTNVLLRPNSLMNSLIANDTSFGAWNDEVSFFDSLGQQLVSAEENTFPCSEIAVEDPALSSMYSMNIGACQEKLQSTLTNQQSSQSDIVTQVDFQSSSNTLHGLSKNIEAVDMSEEFLNFGSLDGLCQWFAPSPDDNNFIAITALDSNLSESIEFNPTSSDWVGSSSLRNIPVTCSAGANSIETSAIMHSPENSFFDFNRDEKNEWWENMPTPAWSPAIFSECVSELNTSTLTGIQNGLLFSEPLSGEASYNPLDSSNFEYELSPNKRQVVEFAQLNTNAIQFRNLARPAKATSDLMDSISYSEKTNNLVRKKDTLPKLQVPRWIDDGHSINNGKAVPTHCQTQNPEEGTTKRTKKRARPKESTRPRPKDRQQIQDCIKELRGIIPNGEKYSIDSLLGQTISYMRYLKIVAEYADKLQEPIELKLIEQANEVALEDSNVEDNKNFGVTWAVDLATPTMECPIIVEDMNTPGQMRIEFLCEGQEGVFGLGIGHNIESIGLKTLKAEMKSRKNKLWAVFIVEIVQQANRHWTRQDVFYFILNLIQQSYTSKIDSANDIANVIDPIDSWLRKSPEKQ* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0781 829 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 626 675 IPR036638 GO:0046983
Lan20g0781 829 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 7 817 - -
Lan20g0781 829 MobiDBLite consensus disorder prediction 584 629 - -
Lan20g0781 829 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 613 662 IPR011598 GO:0046983
Lan20g0781 829 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 54 146 IPR025610 -
Lan20g0781 829 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 7 817 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0781 Lan-Chr20 6663108 6668189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0781 575 800 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 39.823 3.58e-41 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0781 - - lang:109336274 1658.66