Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0776 ATGGCTTCTTCTTCTTCTAGAACCTTCTCCGTCAATCCAAGCGATTACAAACTTCTAGAAGAAGTCGGTGACGGCGCTAGCGCCATCGTGTACCGCGCAATCTACCTCCCTAACAACCGCCAAGTGGCGGTTAAGTGCGTGGATCTAGATCGATGCAACAGCAATCTCGACGATATTAGAAGAGAGGCTCAGACCATGAGCTTAATCGATCACCCTAACGTGGTTCGTGCTTTTTGTTCCTTCGTCGTGGAACGCCACCTTTGGGTGGTTATGCCATTCATGGCGCAGGGTTCTTGTTTGCACCTGATGAAGGTTGCGTACCCTGAGGGATTTGAAGAAGCAGTTATCGCGAGTATATTGAAGGAAACTCTGAAAGCTTTGCAGTACCTTCATCGACAGGGTCGTATTCATCGTGATGTTAAGGCTGGGAATATTTTGCTTGATGATAATGGTGAAGTTAAGGTGGCGGATTTCGGTGTCTCCGCTTGCATTTATGATAATGGTGATAGACAACGCTCTAGAAACACTTTTGTTGGAACTCCTTGCTGGATGGCACCAGAGGTATTGCAACCTGGAACTGGTTATAATTCCAAGGCTGATATTTGGTCTTTTGGGATCACAGCACTGGAGTTGGCTCATGGTCATGCCCCCTTTTCAAAATATCCTCCAATGAAGGTTCTTTTGATGACCATTCAAAATGCTCCTCCAGGACTTGATTATGATCGTGATAGAAAGTTCTCTAAGTCTTTTAAGGAAATTGTTGCTATGTGCCTGGTTAAAGATCAAACAAAGAGGCCTTCAGTGGACAAGTTACTGAAGCACTCCTTCTTCAAAAATGCTAAATCTCCTCAGCTATATGTGAAGAAATTATTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAATCACTCCAGATTAAAGACGCAGCTCAACTTGCACTAAAGAAGATGCCTTCTGCCGAAGAAGAAGCATTATCCCAGAGTAAATATCACCGAGGAGTTAGTGCTTGGAACTTTGATATTGATGATCTGAAAGCTCAAGCTTCAATGTTGAGGGACGACGATGATGATGTTGTAGAGACAAGGGACGAATTTGAAAACAAACTCTTCACCTGTTACAAGGATACAACCACTGATTCCCAATTTAGCAAGTGCAAAAATAATTCAGATAACTTGCAACAAAATGAGTCCATGTTGCAAGTAGGTGGTAATGACACACCACAGAATGAGCAGAGAAATGGATCGATTGTTGAGACAACACCATCTATCTTAGAGAAGGACATGGGAACAAGCAAGATTAAAAGTCAACCAATGCAAATTCCTAAAACTGCAAGTGCGCCGCTTGTGCCAGGCATCGTGCTTGATCAGTCTTCACCTGAGAAATGGCGCGCATTGGAAAGGTTAATTATTGATCCAACAGCAACTACCATAGAGAAGGACATGGGAACAAGCAAGATTAAAAGTCAACTTCGTAAAACTGTAAGTGGTCCGCTTGTGCCAGGCATGGTGCTTGGTCATTCTTTATCTGAAAGAGAGCGCACATTTGAAAGGTCCTCAAATGAAAATCAGTCATTAGGTGAGAAAGTTAACCGTGAACTACGACAAAATCCAAATCTGAGTGGTCCATTACTGCTTCCCAAACGAGCTTCGGCAAATAGTTTATCCGCTCCGATAAAATCTTCCGGAGGATTCAGAGATTCCTTAGAAGATAGGTATAAGGCTAATCTAGTGCAAATTAAAGGACGATTCTCAGTGACGTCAGAAAATTTAGATCTGGTGAAGGATCTTCCTGTAAGTTCAGTTTCACGCCGATCTTCACAGGGATCATCACCACTGAGGAAATCTGCCAGTGTTGGTGATTGGATGTCGGATTGTAAACAAATGCCAACTGGTCAGCCCTCCACAGATTCTGTCAATACCAATAATCCTGCACCATTTCTTATACCTCAACTTCAGAATCTTTTCCAGCAGACATCTATTCAACAGGATCTTATAATGAATTTGTTAAATAGCTTGCAATCTGCTGAGGTAATTGATGCTTCTCAGATTGGAAAGTTGCCACCTTTACCTGGTAGTCCAGTGAGCAATGGAAGTGTTGATACGGCAACTTCAGAGAGGGAACAACTTCTGATAGCCAAAATTGCAGAACTTCGGGCTCGGATGACCAGTCTGACTGATGAACTAGCTTCTGAAAAATTAAAATACAAGCAGTTGCAGCAACAGCTAAATGCTGCCTACAGCCAGGAACAAAATAGGGAAAACAAGGAAGCTGCGTGA 2277 0.4291 MASSSSRTFSVNPSDYKLLEEVGDGASAIVYRAIYLPNNRQVAVKCVDLDRCNSNLDDIRREAQTMSLIDHPNVVRAFCSFVVERHLWVVMPFMAQGSCLHLMKVAYPEGFEEAVIASILKETLKALQYLHRQGRIHRDVKAGNILLDDNGEVKVADFGVSACIYDNGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEIVAMCLVKDQTKRPSVDKLLKHSFFKNAKSPQLYVKKLFADLPPLWNRVKSLQIKDAAQLALKKMPSAEEEALSQSKYHRGVSAWNFDIDDLKAQASMLRDDDDDVVETRDEFENKLFTCYKDTTTDSQFSKCKNNSDNLQQNESMLQVGGNDTPQNEQRNGSIVETTPSILEKDMGTSKIKSQPMQIPKTASAPLVPGIVLDQSSPEKWRALERLIIDPTATTIEKDMGTSKIKSQLRKTVSGPLVPGMVLGHSLSERERTFERSSNENQSLGEKVNRELRQNPNLSGPLLLPKRASANSLSAPIKSSGGFRDSLEDRYKANLVQIKGRFSVTSENLDLVKDLPVSSVSRRSSQGSSPLRKSASVGDWMSDCKQMPTGQPSTDSVNTNNPAPFLIPQLQNLFQQTSIQQDLIMNLLNSLQSAEVIDASQIGKLPPLPGSPVSNGSVDTATSEREQLLIAKIAELRARMTSLTDELASEKLKYKQLQQQLNAAYSQEQNRENKEAA* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0776 758 MobiDBLite consensus disorder prediction 599 616 - -
Lan20g0776 758 SUPERFAMILY Protein kinase-like (PK-like) 13 327 IPR011009 -
Lan20g0776 758 MobiDBLite consensus disorder prediction 512 532 - -
Lan20g0776 758 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Lan20g0776 758 Gene3D Phosphorylase Kinase; domain 1 5 93 - -
Lan20g0776 758 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 466 - -
Lan20g0776 758 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 470 751 - -
Lan20g0776 758 MobiDBLite consensus disorder prediction 599 637 - -
Lan20g0776 758 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0776 758 Gene3D Transferase(Phosphotransferase) domain 1 97 327 - -
Lan20g0776 758 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0776 758 Coils Coil 707 755 - -
Lan20g0776 758 CDD STKc_OSR1_SPAK 14 277 - -
Lan20g0776 758 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0776 758 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 466 - -
Lan20g0776 758 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 470 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0776 Lan-Chr20 6629993 6637385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0776 9 750 MAP Kinase Kinase Kinase Kinase AT4G10730 60.691 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lan20g0776 Pkinase 2.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0776 - - lang:109336545 1475.69