Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0747 ATGCCTGGAAGCATGAACTGCTTACCGTGTTTTACATCTCAGAAAAGTAAGAAAAGCAATAGCAAGAGGGAGCATGGAAATACACCACCGGAAAACGTTACGGCGAAAGCTCCAGATATGAAAAAACCAAGGCCAGATGACCCAAACCAAGTTTTTGACCCTGCAAATATTAATGCACAAAATTACACTTTTCGGGAGCTAGCAACTGCAACAAAGAATTTCAGGCAGGAATGTATGATGGGTGAAGAAGGCTTTGGCAGAATCTACAAAGGGATTATTCCTGCAACTGGCAAGGTTGTGGCTGTGAAGCAACTCGACCGAAATGCTATGCAAGGTTGCAAGGATTATCTGGCTGAGGTTTGGGCGCTAAGTCTCTTGCACCATGAAAATCTGGTCAATCTCATTGGCTATTGTGCTGATGGGGATCAGCGTCTTCTCGTTTATGAATTCATTCAAGCGATTCCTCTGGAAATTCGTCTTTTTGGTGACGAGCCTCCATTAGATTGGTACAACAGAATGAAAATAGCAGTTGGAGCTGCTAGAGGAGTAGAGTACTTGCATGACAGTGCCAATCCTCCAGTTATATACCGGGACTTAAAAGCATCAAACATTTTACTGGATGAGAATCTGAATGTAAGACTAAGTGATTTTGGAATGGCCAAGTTTACTGGTGGAGATAATAAGATGACCCCTTCACCTGCAAGAGTTATGGGTACCTATGGTCACTGTGCTCCAGAGTATGTGAGAACAGGTCAAGTCACTATTAAATCAGATGTATATAGTTTTGGAATTGTCTTGCTAGAGCTCATAACTGGGCGACGAGCAGTTGATACCAGAAGACCAAATGACGAGCAAAACCTAGTTTCATGGGCACAACCCTTATTCAGGGACCCAAAAAGGTTTCCAGATATGGCAGATCCACTTCTTGATAAGCAGTTCCCAGAAAAGGATCTCAACCAAGCTGTTGCAATAGCAGCAATGTGCTTACAAGAGGAACCAGAAGCCCGTCCTTTGATTAGTGATGTTGTAACTGCTCTGAGCTTTCTTTCCGTAGTTCCTCCCGCAGATGCTATTCCACCCTCTGTCTCACATGCCGCATCGGTCTCTAAACATAGTGAAGGTGCAAGTGAAAGTGATAGTGAAAGTGGAAGTGAATATGAAAGTGGAAGCGAAGAAGGGGTTGATAAGGAGAGCCGCAGAAGATATAGTTCAAAGAAGGGTTCTTCTAAGTATAAGGGTGGATCAAGTTCAAAATACCAAGAAAGTGATGTTTCAGAAGATACTATGGGAAGCAAGGAGTTTTACTCCAAATCAAGCCGCAAAAGCAGCACAAGATCAAGGAATGGAACAATCACTTCAGAAGCAGAAGATGGAAGTGTTTCTTCCAGCAACAAAAGCAGTAGGAAACCACACGGAAATTAA 1422 0.4304 MPGSMNCLPCFTSQKSKKSNSKREHGNTPPENVTAKAPDMKKPRPDDPNQVFDPANINAQNYTFRELATATKNFRQECMMGEEGFGRIYKGIIPATGKVVAVKQLDRNAMQGCKDYLAEVWALSLLHHENLVNLIGYCADGDQRLLVYEFIQAIPLEIRLFGDEPPLDWYNRMKIAVGAARGVEYLHDSANPPVIYRDLKASNILLDENLNVRLSDFGMAKFTGGDNKMTPSPARVMGTYGHCAPEYVRTGQVTIKSDVYSFGIVLLELITGRRAVDTRRPNDEQNLVSWAQPLFRDPKRFPDMADPLLDKQFPEKDLNQAVAIAAMCLQEEPEARPLISDVVTALSFLSVVPPADAIPPSVSHAASVSKHSEGASESDSESGSEYESGSEEGVDKESRRRYSSKKGSSKYKGGSSSKYQESDVSEDTMGSKEFYSKSSRKSSTRSRNGTITSEAEDGSVSSSNKSSRKPHGN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0747 473 SUPERFAMILY Protein kinase-like (PK-like) 55 351 IPR011009 -
Lan20g0747 473 MobiDBLite consensus disorder prediction 441 473 - -
Lan20g0747 473 MobiDBLite consensus disorder prediction 389 404 - -
Lan20g0747 473 Gene3D Phosphorylase Kinase; domain 1 59 150 - -
Lan20g0747 473 MobiDBLite consensus disorder prediction 359 473 - -
Lan20g0747 473 CDD STKc_IRAK 80 346 - -
Lan20g0747 473 MobiDBLite consensus disorder prediction 408 424 - -
Lan20g0747 473 PANTHER RECEPTOR-LIKE KINASE LIP1 5 425 - -
Lan20g0747 473 MobiDBLite consensus disorder prediction 425 440 - -
Lan20g0747 473 ProSiteProfiles Protein kinase domain profile. 74 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0747 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Lan20g0747 473 MobiDBLite consensus disorder prediction 365 383 - -
Lan20g0747 473 MobiDBLite consensus disorder prediction 1 51 - -
Lan20g0747 473 PANTHER OS07G0668900 PROTEIN 5 425 - -
Lan20g0747 473 SMART serkin_6 74 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0747 473 Gene3D Transferase(Phosphotransferase) domain 1 155 352 - -
Lan20g0747 473 Pfam Protein kinase domain 78 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0747 Lan-Chr20 6168291 6171656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0747 5 409 Glycoside Hydrolase AT3G07070 55.609 7.22e-157 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan20g0747 Pkinase 3.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0747 - - lang:109335196 857.44