Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0743 ATGATGAAGAGGAATACATCATCTGCATTGTTTGTGATACTAGTATTTACTCTTTCAACTACCCTTTTCATTTGTACATCTAAAGGTCTCAATGAAGAGGGTAAATACCTTCTTGACATAAAAGGGAGTTTGTTTGATAAGCACAAGCACCTTCATAATTGGAATTCAAATGATTCCACACCTTGTGCATGGAAGGGTGTGAATTGCAGCATCAACAACAACCCAGTGGTTGAGTCTCTTGATTTGCATTTGATGAATCTCTCTGGGTCTTTAAGTCCCAGCATTGGTGGTTTGGTTCACTTGTATCAACTTGATCTCTCTCAAAACTCTCTCTTTGGGATTATACCTAAAGAAATTGGAAAGTGTACAAATTTGCAGGTTCTTAGTCTCAACAATAATCTATTTGAAGGCCAGATTCCTAAGGAAGTAGGCATGCTTTCAAATTTGACAGAACTATACCTTTACAACAACCGCATTTCTGGGCCTTTTCCAATGGAAATTGGTAACCTCTCTTCACTTTCAATACTTATTGTATACACCAATAATCTCAGTGGACCTTTGCCAAGTTCCATTGGAAAACTTACGAGATTGACGCGTTTCCGAGCTGGGCAGAATAAGATATCAGGAAGTCTACCTCAAGAGATAGGTGGATGTCAAAGCTTGCAGTATCTTGGTTTAACTGGAAATCAGATAAGTGGTGAAATTCCTAAAGCACTTGGGCTGCTCAAGAATTTACAGTGCTTGACCCTCAGGGAAAATAATCTTCATGGTACCATACCAAAGGAGCTCGGAAACTGTACAAATTTGGAGGTTCTTGCTCTATATCAGAATAATCTTGTAGGAGAAATTCCAAAGGAGCTTGGAAACCTTGTGCTCCTAAAGAAGTTATACCTTTATGGTAATGAGTTGACAGGAGAAATTCCAAGAGAGATAGGGAACCTTTCTCAGGCAACAGAAATTGACTTTTCAGAGAACTTGCTGATAGGAGATATACCAGTTGAGCTAGCTAAATTAACAAGGCTGCAATTGCTTCATCTGTTCCAGAATATGCTAACTGGTGTAATCCCAAATGAGCTCACAAGATTGAAAAATCTTACTGAGGTAGATCTTTCTATTAACTATCTCAAAGGTACTATTCCTGTTGGATTTCAGGACTTGGCCAACTTGACCATCTTGGAACTCTTTAACAACTCACTAAGTGGTACCATTCCTCAAGCACTAGGAGCAAATAGTCCCCTCTGGGTGCTTGATTTATCATACAACCACTTGGTGGGAAGAATTCCGGTCCATCTTTGCCAAAATTCTAACTTGATGCTGTTAAACTTAGGATCAAACAGGCTCACAGGAAATATCCCTTACGAAATTATACGGTGCGAGTCCTTGGTGCATCTTCGCGTCTTTGGTAACCAACTTAGAGGCAGGTTTCCTTCTAACTTGTGCAAACTTGTAAATATTACTACAGTGGAGTTGGATCAGAATGACTTCAGTGGCCCTATTCCTCCACAAATTGGCAATTGTATGAAGTTGCAAAGACTTCACCTTTCTAACAATCATTTTTTGTCTGAATTGCCTAAAGAAATTGGTAATCTCTCTAAGTTGGTCACCTTTAATGTCTCATCAAATCATCTCTATGGTAGAGTGCCTTTGGAAGTGTTAAATTGCAGGATGCTCCAAAGACTTGATCTCAGCCATAACAACTTTGTAGGGACTTTACCAGGTGAGATTGGAACTCTTTTACAACTGGAACTTCTAAGGCTCTCAGATAATAATTTTTCTGGTAATATTCCAGTGTCAGTTGGAAAACTCTTTCGATTAACCGAGTTACAAATGGGTGGAAACTCATTTTCTGGTTGCATACCACATGAGTTAGGTTTCCTCTCAACCTTACAGATTGCACTGAATCTCAGTTATAATAAACTCTCAGGAAAAATTCCTAATGAGCTTGGAGATCTTATTATGCTAGAGTCCCTCCAACTCAATAACAATTATTTGACTGGTGTAATTCCAACCTCCTTTTTGAAACTGTTAAGTTTACTCTCCTTCAACTTCTCAAACAATAACCTTACCGGGAATTTACCATCTTTACCTTTATTTCAAAACTCAACACTTAGTTGCTTTTCTGGAAACAAAGGACTATGCGGAGGACGGCTCGGCCTCTGCACAACTTCATTTTCGCCCTCACCTCCAAATAGATTAGGCAAGGTTCTGGCTATAGCTGCAACTGCTATTAGTGGTGTTTCTTTGGTTTTAATTATGGTCCTTATATATCTTATGAGAGGTCCATGTTCAATGGATTCCATTGTGCCACAGCAAGATAATATAGATAGACCAAACTCTCCACCAGTTTCAGACATGTACTTCTTCCCAACTGAGGATTTAACTTTCCAAAACATGGTTGAAGCCACTGAAAATTTTCATTCCAAGTATGTGATTGGAAAAGGAGGTAGTGGAACTGTGTATAGAGCAGATATATCAACTGGTAATACAATTGCTATTAAGAAACTTGCATCAGGCAGGGAGAGTATCAATGTAAATGGTTGTTTTCGTGCCGAAATCTTAACTTTGGGGAAAATAAGGCATCAGAATATTGTGAAATTATATGGTTCCTGCAACTACCATGGTTCTCATATACTGCTTTATGAGTATATGGCAATGGGTAGTTTGGGAGAATTACTTCATGGAGCATCTTGTAGTCTCGATTGGCACGCTCGGTTTAGGATTGCGCTTGGAACTGCACAAGGACTCTCTTATTTGCACCATGATTGCAAGCCTAGGATTATTCACCGCGATATAAAGCCCAATAACATACTTCTTGACCATGAATTTGAAGCTCATGTTGGGGACTTTGGCTTGGCTAAGGTGATCGATGTATCACGGTCTAAATCAATGTCTGCAGTTGTAGGTTCTTATGGCTACATTGCCCCTGAGTATGCATACACCATGAAAGTCACAGAAAAATGTGATGTCTACAGCTATGGAGTTGTCCTTTTGGAGTTATTAACCCGCAAGAAGCCGGTCCAACCCGTAGATGAAGGCGGCGATCTTGTGACATGGGTGAGAAATCAAATCCACAAACATTCTTTGACACTAGACATCCTTGATCCTAGATTGGATCTAGTAGATGAAATAGATGTTGCTCAAATTTTTGATGTCTTAAAAATTGCTGTACTCTGCACTGAAGCCAATCCTTCTAAGCGCCCAACAATGTGTAAAGTTGTGTCAATGCTTTTAAGTTGTAGCAAAAGGACAGAGCAAACATCTTCCTCTCCATCTCAAGAATCAAGATGCTAA 3291 0.3941 MMKRNTSSALFVILVFTLSTTLFICTSKGLNEEGKYLLDIKGSLFDKHKHLHNWNSNDSTPCAWKGVNCSINNNPVVESLDLHLMNLSGSLSPSIGGLVHLYQLDLSQNSLFGIIPKEIGKCTNLQVLSLNNNLFEGQIPKEVGMLSNLTELYLYNNRISGPFPMEIGNLSSLSILIVYTNNLSGPLPSSIGKLTRLTRFRAGQNKISGSLPQEIGGCQSLQYLGLTGNQISGEIPKALGLLKNLQCLTLRENNLHGTIPKELGNCTNLEVLALYQNNLVGEIPKELGNLVLLKKLYLYGNELTGEIPREIGNLSQATEIDFSENLLIGDIPVELAKLTRLQLLHLFQNMLTGVIPNELTRLKNLTEVDLSINYLKGTIPVGFQDLANLTILELFNNSLSGTIPQALGANSPLWVLDLSYNHLVGRIPVHLCQNSNLMLLNLGSNRLTGNIPYEIIRCESLVHLRVFGNQLRGRFPSNLCKLVNITTVELDQNDFSGPIPPQIGNCMKLQRLHLSNNHFLSELPKEIGNLSKLVTFNVSSNHLYGRVPLEVLNCRMLQRLDLSHNNFVGTLPGEIGTLLQLELLRLSDNNFSGNIPVSVGKLFRLTELQMGGNSFSGCIPHELGFLSTLQIALNLSYNKLSGKIPNELGDLIMLESLQLNNNYLTGVIPTSFLKLLSLLSFNFSNNNLTGNLPSLPLFQNSTLSCFSGNKGLCGGRLGLCTTSFSPSPPNRLGKVLAIAATAISGVSLVLIMVLIYLMRGPCSMDSIVPQQDNIDRPNSPPVSDMYFFPTEDLTFQNMVEATENFHSKYVIGKGGSGTVYRADISTGNTIAIKKLASGRESINVNGCFRAEILTLGKIRHQNIVKLYGSCNYHGSHILLYEYMAMGSLGELLHGASCSLDWHARFRIALGTAQGLSYLHHDCKPRIIHRDIKPNNILLDHEFEAHVGDFGLAKVIDVSRSKSMSAVVGSYGYIAPEYAYTMKVTEKCDVYSYGVVLLELLTRKKPVQPVDEGGDLVTWVRNQIHKHSLTLDILDPRLDLVDEIDVAQIFDVLKIAVLCTEANPSKRPTMCKVVSMLLSCSKRTEQTSSSPSQESRC* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0743 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Lan20g0743 1096 SMART LRR_typ_2 242 266 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 651 674 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 98 122 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 338 361 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 386 410 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 362 385 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 146 170 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 508 530 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 578 602 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 194 218 IPR003591 -
Lan20g0743 1096 SMART LRR_typ_2 290 314 IPR003591 -
Lan20g0743 1096 Gene3D Ribonuclease Inhibitor 29 180 IPR032675 -
Lan20g0743 1096 PANTHER LRR RECEPTOR-LIKE KINASE 8 1087 - -
Lan20g0743 1096 Gene3D Ribonuclease Inhibitor 430 725 IPR032675 -
Lan20g0743 1096 ProSiteProfiles Protein kinase domain profile. 805 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0743 1096 ProSitePatterns Protein kinases ATP-binding region signature. 811 834 IPR017441 GO:0005524
Lan20g0743 1096 SUPERFAMILY Protein kinase-like (PK-like) 779 1076 IPR011009 -
Lan20g0743 1096 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lan20g0743 1096 Pfam Protein kinase domain 806 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0743 1096 Gene3D Phosphorylase Kinase; domain 1 776 882 - -
Lan20g0743 1096 Gene3D Transferase(Phosphotransferase) domain 1 883 1095 - -
Lan20g0743 1096 SUPERFAMILY L domain-like 457 716 - -
Lan20g0743 1096 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1087 - -
Lan20g0743 1096 SMART serkin_6 805 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0743 1096 Pfam Leucine rich repeat 364 423 IPR001611 GO:0005515
Lan20g0743 1096 Gene3D Ribonuclease Inhibitor 181 429 IPR032675 -
Lan20g0743 1096 SUPERFAMILY RNI-like 79 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0743 Lan-Chr20 6122676 6126316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0743 55 1076 Receptor kinase-like Gene Family AT1G73080 39.004 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan20g0743 Pkinase 9.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0743 - - adu:107465566 1548.1