Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0739 ATGGAAGACAATGACAACAACAACAACAACAACCTCGCCTCCTACTTCCACCACTTCAACCACCACCACCAACAAGAAACCACCGTGTCTCCGACCAATGGGGTCTTTCCTACTTCAACCACTGATGGGTCCCACTCTCACTCTCATATGCTGTACCCTCACACCACCACAACCACCGCAACCACTACGGCAGCAACTACTGTAGTTCCATCGTCCCGATTTCAAAAGAAGAAGAGAGGGAGACCTAGAAAATACGCTTCTCCAGAACAAGCCCTTGCTGCTAGGAAGCTTAATACGACGTCGTTTTCTCCTTCCCATGCACCCTCTCCCGTTCCTCTCTCTGTTTCTTCTTTCAATAAATCTTCTCACTCGTTCTCTCTAGGTACTGCAGGACAAGACTTCACTACACATTTTATTTCTGTTCTTGCTGGTGAGGATGTTGGCCAAAAAATTATGTTGTTCATGCAACAAAGCAGGCGCGAGATTTGCATTTTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTTAATCAGCCAGCAACATCAGGAGGCAGTATTACATATGAGGGTCGGTTTGAGATTGTTTCACTTAATGGTTCCTATATCCGTAACGAAGTCGGCAGTCGATCTGGTGGTCTCAGTGTATGCTTATCTAATACTGATGGGCAAATCATAGGTGGTGGTGTTGGTGGACCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACTTTCGTTATTGACCCCAAGAAGGATGCTAGAGCTGGAATTAAAGGTGACATTTCCTCCAGCAAGTTGCCACCACTGCCAGTCAGTGAATCAGTATCAAGCTTTGGTTTCGGCCGAGCAGTTGACTCTTCTACTGGGAATCCAATAAGGGGAAATGATGAGCATCAGACTATTGGAGGAAGCCATTTCATGATTCAACAAGGTGGTATGCAAGGGACACATTCCCATCCCTCTGACTGGGGAGGTCATCTGGATTTAAGAAATGCTGGCTTCGAACTGACAGGAAGAACTGGTCATGGAACACACCAGTCACACGATGAGAACGGGGATTACGAGTAA 1071 0.4669 MEDNDNNNNNNLASYFHHFNHHHQQETTVSPTNGVFPTSTTDGSHSHSHMLYPHTTTTTATTTAATTVVPSSRFQKKKRGRPRKYASPEQALAARKLNTTSFSPSHAPSPVPLSVSSFNKSSHSFSLGTAGQDFTTHFISVLAGEDVGQKIMLFMQQSRREICILSASGSISNASLNQPATSGGSITYEGRFEIVSLNGSYIRNEVGSRSGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFVIDPKKDARAGIKGDISSSKLPPLPVSESVSSFGFGRAVDSSTGNPIRGNDEHQTIGGSHFMIQQGGMQGTHSHPSDWGGHLDLRNAGFELTGRTGHGTHQSHDENGDYE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0739 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 350 IPR039605 GO:0003680
Lan20g0739 356 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 247 IPR005175 -
Lan20g0739 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 350 - -
Lan20g0739 356 MobiDBLite consensus disorder prediction 309 356 - -
Lan20g0739 356 ProSiteProfiles PPC domain profile profile. 128 268 IPR005175 -
Lan20g0739 356 CDD DUF296 135 246 IPR005175 -
Lan20g0739 356 Gene3D - 135 262 - -
Lan20g0739 356 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0739 Lan-Chr20 6090885 6094158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0739 42 356 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 47.941 1.10e-75 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0739 - - lang:109345383 489.574