Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0723 ATGTCTTCTTCATCGTATCCTGTTCTTCCTACTTCCTCCGTGCAGTCTGCATCAATAAATTCCAAAGTCGGAAGTGGTGGACACATGTTTTCAACTCCTGCTGGATGCCCTGATGACATCCCATTTTCACCTGTCTCAGAAATGCACTCTCCAACATTCATTTCTCACCCTCATGAAAGTGGTGATGTTTCATGGGAGCCGTACCTGTTTCAGGATTTTATCCAGTTTCCTGATAGTGTTCCCATCCAAAACAATCAGGTGGAAAATAGTGCTTCTTACATATCTGGTGACATTGCCCAAACAACTGATCTCGTCGAATGGGTTGATGTTGATCAGTTACTGTCAGTTGATGATTCTCTTCTGCCAAACTGGAGTCCTCTTCTTGGTGGTGATAATGTTACAGAACCAAAGCCAGAGGAGATCCAGGTTTCACAGCAACAACATGCACAACGTACAGAACTTAGTGGTCTTCCTAACTCAGTGTCAACCATACCACAAACGAAGTCCAGAATGCGTTGGACTCCAGAACTTCATGAGGCTTTTGTGGAAGCAGTCAATCAGCTTGGCGGTAGTGAGAAGGCTACTCCAAAGGGTGTCTTGAAGCTGATGAAAGTTGAAGGCCTTACCATATATCATGTGAAAAGCCACCTACAGAAGTATAGAACTGCCAGATACAAACCTGAGCCATCAGAAGTAACTTCTGAGAAAAAGTTGGCTGAAGTCGAAGAAATGAAGTCTCTAGACTTAAAAACGAGCAAGGGGATTACCGAAACACTGCGGATGCAGATGGAACTCCAGAAGCGACTTCATGAACAACTTGAGATTCAAAGAGACTTACAGATTCAAATTGAAAACCAAGGGAAGCGTCTTCAGATGATGTTTGAGAAACAGATAGAGAAGGACAAGCCTTCTGCTTCGATATCAAATACAGTGGCCGTGCTACCTTCTCCCATCGAGAGTTTAGAAACAAATGAGAAATTTCAAATCAAAAGTAGCACTACAGAAACCTTGCTTGAAGAAAGTACCCAGGATGCAAGCACAAAACAAAAGAGAAACGATGCTAAAGATGCTAGTGAGCATGAGCTGGGAGGTGACGAGTTTGCTGCACCACTCTCAAAACGGGTGAAGAGTTTATGA 1137 0.4336 MSSSSYPVLPTSSVQSASINSKVGSGGHMFSTPAGCPDDIPFSPVSEMHSPTFISHPHESGDVSWEPYLFQDFIQFPDSVPIQNNQVENSASYISGDIAQTTDLVEWVDVDQLLSVDDSLLPNWSPLLGGDNVTEPKPEEIQVSQQQHAQRTELSGLPNSVSTIPQTKSRMRWTPELHEAFVEAVNQLGGSEKATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYKPEPSEVTSEKKLAEVEEMKSLDLKTSKGITETLRMQMELQKRLHEQLEIQRDLQIQIENQGKRLQMMFEKQIEKDKPSASISNTVAVLPSPIESLETNEKFQIKSSTTETLLEESTQDASTKQKRNDAKDASEHELGGDEFAAPLSKRVKSL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0723 378 Pfam MYB-CC type transfactor, LHEQLE motif 255 298 IPR025756 -
Lan20g0723 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 10 377 IPR044848 GO:0003700
Lan20g0723 378 SUPERFAMILY Homeodomain-like 166 222 IPR009057 -
Lan20g0723 378 MobiDBLite consensus disorder prediction 344 367 - -
Lan20g0723 378 Gene3D - 167 226 - -
Lan20g0723 378 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 168 222 IPR006447 GO:0003677
Lan20g0723 378 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 10 377 - -
Lan20g0723 378 Pfam Myb-like DNA-binding domain 170 221 IPR001005 -
Lan20g0723 378 MobiDBLite consensus disorder prediction 330 378 - -
Lan20g0723 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 225 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0723 Lan-Chr20 5945597 5949770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0723 21 312 G2-like Transcription Factor Family AT4G28610 46.914 2.75e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan20g0723 Myb_DNA-binding 6.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0723 - - mtr:MTR_1g080330 418.313