Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0722 ATGGCTCCTGATCCAAGAGTTGCTAAGGCCTTTAATGCTTCGAGGGCATTAGGAATCTCCGACGAAGAAATGAAGCCGGTGTTGAAATACTTGTTAAATGTGTATGGTGGAAAGTGGGAACTTATTGAAGAAGACAATTATCGAACACTTGTGGATGCATACTTTGAATTAAAGGAGGATAAGCAAACAGAAGGTAAGAAAAAAGCTCCAATCAGTGATAATGAGGGTGAAAGACCAAGACAGAAACAGAACTCAGTAGATGGAGATGAGCAGGATTTTTCAGGTGGCAAATCAAGACAAGTCTCTGTAAAAAGAGATAGCGAAATACAGAAGAATCCTGAAGATCCAATTGATGAACCTAGTATTTCTCATATCCAGAGGGAAAAGATGCTAAGTAATCATCATCAGAAGGAACTAATGACCCGAAGAATTGAGAAACCTCTTACTCTCATGCCAAATGACCGTGTTCAGAATGAGCTCATGGCACCAAGAGTTGAGAAACCGAAGTTACGTCCTGGACCTGCGTCAGCGAGTCAAAGAGGCCCAATTAATGTATCTTCAAGTGGAAATGCTCGTATGAAGTCTCTGTCAACTCTGTACCAGAAAGATGAGAAAGGTGAGAAAGATGAGAAAGATGATACACTTGTTACTCAAGATACAAGTGGAATTCCCCCGAAGTTTCTCAGCGACATAACGAAGGGCTCAGAAAATGTCAAGATATCTTTATTAGATGAAACGGGGAGAGAGGAATTGCCAAAGTTTAATTACACACCGTGTAATATAATATACCAATGTGCTAATGTCAACATTTCACTAGCGCGAATTGCGGATCAGGGTTGCTGTTTTGATTGTTCAGGGGACTGTCTTTCCTTACCATTTCCTTGCGCTTGTGCTCAAGAAACTGGTGGAGAGTTTGCTTACACACAACAAGGTTTGCTGAAAGAAGAATTTCTGGAAGATTGCATCTCTATGAAGAATGAACCCAAAGCTCATCACTTTCTGTATTGTCAAGAATGCCCCTTGGAGAGGTTTAAGAACGAAATCAAGCCTGAACCATGCAAGGGGCATTTGGTTAGGAAGTTTATAAAGGAATGTTGGAGAAAGTGCGGATGTGACATGCAGTGTGGAAATCGTGTAGTGCAAAGAGGTTTAACATGCAAATTGCAGGTGTTCTTGACTGGTGAAGGAAAAGGGTGGGGCGTTCGAGCACTGGAAGAGTTGCCCAAGGGAAGCTTTGTCTGCGAATATGCTGGGGAGATATTAACCAATACAGAATTATATGAAAGGACTGTGCGTTATGGCGGCAATGAGAAACATACATATCCCGTAACCCTGGATGCAGATTGGGGTTCAGAAGGGGTGTTAAAGGATGAGGAGGCACTGTGCTTAGATGCAACATTTAATGGAAATGTTGCAAGGTTTATCAATCATAGGTGCTCGGATGCAAATCTGTTTGACGTTCCAGTTGAAGTGGAGACTCCTGATCGTCACTATTATCATCTTGCGCTCTTTACAAACAGAAAAGTGAAAGCATTCGAGGAGTTGACATGGGATTATGGAATTGACTTTGATGATCATGAACATCCTATTAAAGCATTTCATTGTTGCTGTGGAAGTGCTTTTTGCCGTGATAAGAAACAAAAAGGAACTAGATTTTCGCAGACTAAAAAACCCAGGAAGACATACACACAGATGGAATAG 1701 0.4145 MAPDPRVAKAFNASRALGISDEEMKPVLKYLLNVYGGKWELIEEDNYRTLVDAYFELKEDKQTEGKKKAPISDNEGERPRQKQNSVDGDEQDFSGGKSRQVSVKRDSEIQKNPEDPIDEPSISHIQREKMLSNHHQKELMTRRIEKPLTLMPNDRVQNELMAPRVEKPKLRPGPASASQRGPINVSSSGNARMKSLSTLYQKDEKGEKDEKDDTLVTQDTSGIPPKFLSDITKGSENVKISLLDETGREELPKFNYTPCNIIYQCANVNISLARIADQGCCFDCSGDCLSLPFPCACAQETGGEFAYTQQGLLKEEFLEDCISMKNEPKAHHFLYCQECPLERFKNEIKPEPCKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLTCKLQVFLTGEGKGWGVRALEELPKGSFVCEYAGEILTNTELYERTVRYGGNEKHTYPVTLDADWGSEGVLKDEEALCLDATFNGNVARFINHRCSDANLFDVPVEVETPDRHYYHLALFTNRKVKAFEELTWDYGIDFDDHEHPIKAFHCCCGSAFCRDKKQKGTRFSQTKKPRKTYTQME* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0722 566 Pfam Pre-SET motif 231 378 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan20g0722 566 SMART set_7 386 526 IPR001214 GO:0005515
Lan20g0722 566 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 558 IPR025776 -
Lan20g0722 566 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 187 - -
Lan20g0722 566 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 181 550 - -
Lan20g0722 566 MobiDBLite consensus disorder prediction 179 197 - -
Lan20g0722 566 Pfam Ubiquitin-binding WIYLD domain 5 59 IPR018848 GO:0018024
Lan20g0722 566 Gene3D SET domain 208 532 IPR046341 -
Lan20g0722 566 ProSiteProfiles SET domain profile. 386 520 IPR001214 GO:0005515
Lan20g0722 566 SMART preset_2 228 370 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan20g0722 566 MobiDBLite consensus disorder prediction 163 221 - -
Lan20g0722 566 Gene3D - 1 60 IPR043017 -
Lan20g0722 566 MobiDBLite consensus disorder prediction 198 216 - -
Lan20g0722 566 MobiDBLite consensus disorder prediction 58 123 - -
Lan20g0722 566 MobiDBLite consensus disorder prediction 99 123 - -
Lan20g0722 566 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 181 550 - -
Lan20g0722 566 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 187 - -
Lan20g0722 566 MobiDBLite consensus disorder prediction 58 87 - -
Lan20g0722 566 Pfam SET domain 398 520 IPR001214 GO:0005515
Lan20g0722 566 CDD SET_SETDB-like 252 520 - -
Lan20g0722 566 SUPERFAMILY SET domain 239 543 IPR046341 -
Lan20g0722 566 ProSiteProfiles Pre-SET domain profile. 284 383 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0722 Lan-Chr20 5934539 5943694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0722 362 543 C2H2 Transcription Factor Family AT2G23740 41.711 2.69e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan20g0722 Pre-SET 2.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0722 - - mtr:MTR_1g080340 670.233