Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0719 ATGCAGATCAATCTGCTAATCTTATTCTCTTTCATTGGCATCTCTCTTGTTTTTACTGAGGGAATTCAAGCTGCAGAAGATGGTGAATTGTTAACTCTACTTTCAATCAAATCCAGTATCATTGATCCAATGAACTATCTGAAGGATTGGCAGCATCAAAGCAATGTTACACAAGGAGGTTCACCTCATTGTAGCTGGACAGGAGTTTGGTGCAACTCTAAAGGCTTGGTAGAGACTCTTGACATCTCTAATATGAACCTTAGTGGTCGAGTTTCAGACCGCGTCCAATCGCTTTCGAGCCTGTCTTATTTCAACATAAGTAGTAATAACTTTGCTTCATCATTTCCCATATCACTCTCCAACCTCACCTCTCTGAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTTCCCATTGGTCTTGGAAGAGCTGCAGGATTGAAATACATTAACGCGTCAAGTAACGATTTTATGGGTTTTATTCCAGAGGATATTGGAAATGCAACATCGCTCGAGAGCCTTGATTTCCGAGGGAGCTACTTTGTTTCAATCCCAAGGAGTTTTAAGAACTTGCAGAAGCTCACATTTCTTGGCCTTTCAGGCAATAACTTCACAGGGAAGATTCCAGGATATCTTGGTGAACTTAGTTCTCTGGAGACATTGATTCTTGGATACAATGAGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTGACCAATCTTCAATACCTCGACTTGGCTGTAGGGAGTCTCAGTGGACAAATTCCACTTGAGTTGGGTAAGCTGAAAAAACTTACTACAATTTACTTATACCATAACAACTTCACTGGAAAAATTCCACCTCACTTTGGCAACATTACATCACTAGCATTTTTGGACCTCTCTGACAACCAGATCTCAGGAGAGATTCCAGAAGAATTTGCTAATTTGGAAAGCCTGCAGCTCTTGAATTTGATGACCAACAATTTAACTGGTCCTATACCAGAGAAGCTTGGTGAATTGAAAAACTTGCAGGTGCTTGAGCTATGGAAAAACTCTTTAAAGGGTCCTTTGCCAGAAAACCTTGGAAAGGTATCTCCTTTGGAGTGGTTGGATGTATCCTCTAACTCGTTATCCGGCGAGATCCCTCCAGGTTTGTGTTCTAGAGGCAATCTCACTAAACTAATCCTTTTCAACAATTCTTTTTCCGGTTCCATTCCAAGTGGACTCTCAAACTGTTCTTCTTTGGTACGTGTTCGGATTCAGAATAATCTTATTTCTGGAACTATTCCTGTTGGGTTTGGAAGCCTTCCAAGTCTTCAACGGCTGGAATTGGCAAAGAACAACCTCACTGGGGAAATTCCTAAAGGCATTACCTTATCCACATCTCTCTCTTTCATTGATGTATCTTGGAACCACCTTGACTCTTCTCTGCCCTCAGAAATTCTTTCTGTTCCAACCCTTCAAACCTTCATTGCCTCCCACAACAACTTTGAAAGTGATATCCCAGAAGAGTTCCAGGACTGTCCATCACTTTCAGTGCTGGATCTTTCCAACACCCATATCTCTGGCAAAATCCCAGAAAGTATTGCTTCTTGTCAAAAACTAGTCAACCTTAACCTTAGGAACAATCATTTGACAGGTGAAATCCCAAAATCAATCACAAACATGCCAACCTTATCTATTCTTGATCTGTCCAACAACTCACTCACTGGTAGGATACCAGAAAATTTTGGAAGTTCACCAGCTCTGGAAATGCTGAACCTGTCCTACAACAAACTTGAGGGTCCAGTACCCTCAAGTGGGATCCTTATGACCATGAATCTTAATGATCTTATCGGCAATGCCGGTCTTTGTGGGGGAATTCTCCCTCCATGTTCTCAGAGTTTTGCAGATGTAAGCCATCCACATGGGAGATCACACATCAGACACATCATCATTGGTTTTGTTACTGGCATTTCAGTGATTTTATCTATTGGTGCAGCATTTTTTGTTGGCAGATGCTTATACAAAAGGTGGTACTTGTGTAACAATTTCATCCATGATTGGCTCAAACAGACCAATGAAGATTGGCCCTGGAGGTTAGTAGCATTCCAAAGGATCAGTTTAACTAGTAGTGACATCCTAACATGCATAAAGGAATCAAATGTCATTGGCATGGGTGGCACTGGTATTGTTTACAAAGCAGAAATCAATAGACCTCATGTAACAGTAGCTGTGAAGAAACTGTGGAGGTCAGCAACAGACATAGAAGAAGGCAATAATATACTGAGAGAAGTGGAACTCCTAGGAAGACTTAGGCATAGAAATATTGTAAGGCTCTTAGGATATGTTCACAATGAAAGGGATGTGATGATGGTTTGTGAGTACATGCCTAATGGAAATCTTTGGACAACACTGCATGGTGAACAATCTGCAAGGTTGCTTGTAGATTGGGTCTCAAGGTACAACATAGCTCTTGGAATTGCGCAAGGGCTAAACTACCTCCACCATGATTGTCATCCACCAATTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGATGCAAATTTGGAGGCAAGGGTAGCAGATTTCGGGTTGGCAAGGATGATGATCCAGAAAAACGAGACACTTTCGATGGTGGCCGGATCTTATGGATATATTGCACCAGAATATGGATACACTCTGAAGGTTGATGAGAAGATTGACATATACAGTTATGGTGTGGTACTTTTGGAGCTCATAACAGGCAAAATGCCTTTGGACCCTGCATTTGAAGAGTCTGTGGAAATTGTTGAATGGATACGAAAGAAGAGATGCAAAAATGCCTTAGAAGAAGCATTAGACCCCACCATAGCTGGTCAGTGCAAACATGTTCAAGAAGAGATGCTTCTTGTACTTCGAATCGCAATTTTATGTACTGCAAAGCTTCCCAAGGAAAGACCATCTATGAGAGATATCATCACAATGCTTGGAGAAGCAAAACCGAGAAGAAAAAGCACTTGCCATAGTAAAGGTCAAGAAAGTAGCATGGATAAGCCAATATTTACCACTTCCCCAGTAGTAAACCTTTTGTAG 3051 0.4143 MQINLLILFSFIGISLVFTEGIQAAEDGELLTLLSIKSSIIDPMNYLKDWQHQSNVTQGGSPHCSWTGVWCNSKGLVETLDISNMNLSGRVSDRVQSLSSLSYFNISSNNFASSFPISLSNLTSLKSFDVSQNYFTGSFPIGLGRAAGLKYINASSNDFMGFIPEDIGNATSLESLDFRGSYFVSIPRSFKNLQKLTFLGLSGNNFTGKIPGYLGELSSLETLILGYNEFEGEIPAEFGNLTNLQYLDLAVGSLSGQIPLELGKLKKLTTIYLYHNNFTGKIPPHFGNITSLAFLDLSDNQISGEIPEEFANLESLQLLNLMTNNLTGPIPEKLGELKNLQVLELWKNSLKGPLPENLGKVSPLEWLDVSSNSLSGEIPPGLCSRGNLTKLILFNNSFSGSIPSGLSNCSSLVRVRIQNNLISGTIPVGFGSLPSLQRLELAKNNLTGEIPKGITLSTSLSFIDVSWNHLDSSLPSEILSVPTLQTFIASHNNFESDIPEEFQDCPSLSVLDLSNTHISGKIPESIASCQKLVNLNLRNNHLTGEIPKSITNMPTLSILDLSNNSLTGRIPENFGSSPALEMLNLSYNKLEGPVPSSGILMTMNLNDLIGNAGLCGGILPPCSQSFADVSHPHGRSHIRHIIIGFVTGISVILSIGAAFFVGRCLYKRWYLCNNFIHDWLKQTNEDWPWRLVAFQRISLTSSDILTCIKESNVIGMGGTGIVYKAEINRPHVTVAVKKLWRSATDIEEGNNILREVELLGRLRHRNIVRLLGYVHNERDVMMVCEYMPNGNLWTTLHGEQSARLLVDWVSRYNIALGIAQGLNYLHHDCHPPIIHRDIKSNNILLDANLEARVADFGLARMMIQKNETLSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELITGKMPLDPAFEESVEIVEWIRKKRCKNALEEALDPTIAGQCKHVQEEMLLVLRIAILCTAKLPKERPSMRDIITMLGEAKPRRKSTCHSKGQESSMDKPIFTTSPVVNLL* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0719 1016 Gene3D Ribonuclease Inhibitor 282 381 IPR032675 -
Lan20g0719 1016 Pfam Leucine rich repeat N-terminal domain 28 72 IPR013210 -
Lan20g0719 1016 SUPERFAMILY L domain-like 29 249 - -
Lan20g0719 1016 ProSiteProfiles Protein kinase domain profile. 708 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0719 1016 SUPERFAMILY RNI-like 233 587 - -
Lan20g0719 1016 Gene3D Ribonuclease Inhibitor 382 623 IPR032675 -
Lan20g0719 1016 SUPERFAMILY Protein kinase-like (PK-like) 703 982 IPR011009 -
Lan20g0719 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Lan20g0719 1016 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Lan20g0719 1016 Gene3D Ribonuclease Inhibitor 186 281 IPR032675 -
Lan20g0719 1016 PANTHER UNNAMED PRODUCT 7 999 - -
Lan20g0719 1016 SMART serkin_6 708 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0719 1016 PRINTS Leucine-rich repeat signature 292 305 - -
Lan20g0719 1016 PRINTS Leucine-rich repeat signature 553 566 - -
Lan20g0719 1016 Pfam Protein kinase domain 710 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0719 1016 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 7 999 - -
Lan20g0719 1016 ProSitePatterns Protein kinases ATP-binding region signature. 714 738 IPR017441 GO:0005524
Lan20g0719 1016 Gene3D Phosphorylase Kinase; domain 1 707 790 - -
Lan20g0719 1016 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515
Lan20g0719 1016 Pfam Leucine rich repeat 267 326 IPR001611 GO:0005515
Lan20g0719 1016 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Lan20g0719 1016 Gene3D Transferase(Phosphotransferase) domain 1 791 1007 - -
Lan20g0719 1016 SMART LRR_typ_2 289 312 IPR003591 -
Lan20g0719 1016 SMART LRR_typ_2 217 240 IPR003591 -
Lan20g0719 1016 SMART LRR_typ_2 361 385 IPR003591 -
Lan20g0719 1016 SMART LRR_typ_2 265 288 IPR003591 -
Lan20g0719 1016 SMART LRR_typ_2 433 457 IPR003591 -
Lan20g0719 1016 SMART LRR_typ_2 313 337 IPR003591 -
Lan20g0719 1016 SMART LRR_typ_2 553 577 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0719 Lan-Chr20 5917699 5921378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0719 5 1016 Receptor kinase-like Gene Family AT1G08590 63.981 0.0 1280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan20g0719 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0719 - - gmx:100793873 1680.23