Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0711 ATGCATGCTATCAATGCCCTTGTATCTCTTCTTTGCACCCTTGTTTTGTTGAATTCCCTTATTCATGCATCAAGCAAGGACTCAGATCCATTGATCTTAGGGTGTGGCTTGGGAGAAGGTGGTGGCAAAGATGATGATGGAAGAGAATGGTTACCAGACAATAAATATGTTTCAGGAGGCAATTCCATCACATCTAAAGCCTTATTCCAAGACCCTTCACTTTTGTCTGTGATTCCGTACATGACAGCAAGAATTTTCACATCAGAAGCAACTTATAAATTCCCTGTTCAGCCGGATAAGCGTTACTGGCTCAGGCTCCATTTCTATCCCTCTGTTTATGATAGTTACAATCCTTCCAATTCATATTTCTCTGTCACTGCAAATGGTGTTACCCTTCTCAGCAATTTCAGCGCTTCAATTACTTGCCAGGCACTCTCACAAGCTTATCTTGATAGAGAGTATTCGCTCGCGCCTTTGAATTCGGATACTCTCACCCTTGTATTTAAGCCTTCTGATAAGTACAATGGGGCTTTTGCTTTTGTCAATGGCATTCAGCTTATGCAAATGCCTGAGTTGTTTGATTCTGCTTCATTGGTAGGGTACGCTGACCAAACCGTGGACGCGAAAAGTTTACATTTGCAAACAATGTTTAGATTAAATGTTGGTGGGCAATACATATCTCCGAATCAAGATTCTGGTCTAAGCAGAATGTGGTATGATGATACACCTTATATATATGGTGCAGCCACTGGTGTCACCAATCAAGTTGCCAAGGATGTTAAAATTGACTACCAAACAATGGCTCAGTACATTGCTCCTTCTAGTGTCTACTCCACATCAAGATCCATGGGCAATAATAAGGATATCAACATGGGGTACAATCTCACATGGATTTTCCAAGTTGATCCAAATTCAATGTACCTTACAAGGTTGCATTTCTGTGATTATTATTATTCCAAAGTCAATGAGATTGTTTTCAATATATATGTCAACAATCAATCGGCGCAGGCTCAAGCAGATGTAATTGGGTGGACAGGAGGTAAAGGAGTACCAACTTACAAAGACTATGTAGTATATGTGCAAGATCAGGCAGGTGAAGATACACTTTGGCTTGCTCTGCACCCAGCACCTGATACAAAGCCTGAGTATTATGATGCTATACTCAATGGAGTGGAGATATTCAAACTCAATGACACAAACTTGTCTGGGCCTAATCCTCAGCCTTCAGAAATGATGGTTGAACATGAGGAAGAAAAAAAATTCGAAGAAAAAGATACACATTATAGCAAGACTTCTGTTATTGGTGGAGCTGCTGGAAGTGCTATAGGTGTTGCCTTAGTGACCGCAATATGCATTGTTGTACACAAAAAGAAGATGTCTCCTGGATCATACTCACACAACTCAAGCTGGCTTCCTCTCTATGGAAATTCACAATTAAGCGGCAACTCCAAATCTACAATTTCTGGCAAGAGTACTGTTGGCAGTACCAACTTATCAGCCATGGCTCAAGGACTGTGCCGCTATTTCTCATTACAAGAGATGAAGCAAGCGACCAAGAATTTTGATGAGGCCAATGTTATTGGTGTTGGAGGGTTTGGAAAGGTTTACAAGGGTGTCATTGATAATGGCCTTAAAGTGGCAATCAAAAGATCTAACCCTCAATCAGAACAAGGAGTTAATGAATTCCAGACTGAGATTGAGATGCTTTCTAAACTAAGACACAAGCACTTGGTGTCATTGATTGGATTCTGCGAGGAAGATGAGGAAATGTGCTTGGTTTATGACTTCATGGCACTTGGCACCATGAGAGAACATCTTTACAAAGGAAACAAACCAATAAGTACTCTTTCATGGAAGCAAAGGTTGGAGATATGCATTGGAGCAGCAAGAGGCCTTCATTACCTTCACACTGGGGCAAAGTACACCATCATTCATAGAGATGTCAAAACAACTAACATTCTCCTTGATGAAAACTTCGTTGCCAAGGTTTCAGATTTTGGATTGTCAAAAACTGGTCCAAACATGAACCAAGGTCATGTTAGCACTGTGGTAAAGGGTAGTTTTGGATACTTGGATCCTGAATATTTCAGGAGGCAACAATTGACTGAGAAGTCTGATGTATACTCATTTGGGGTTGTCCTGTTTGAGGCTCTTTGTGCAAGGCCTGCTCTGAACCCTAGCCTTCCAAAGGAACAAGTGAGCCTAGCTGAATGGGCTTTGACATGCAAAAGAAAAGGGGCATTGGATGATATTATTGACCCTAGTCTCAAAGGAAAGATCAACCCTGAAAGCTTGAAGAAGTTTGCAGATACAGCTGAGAAGTGTTTGTCTGATCATGGACTCGACCGGCCATCCATGAATGATCTGTGTTGGAATCTAGAATTTGCTCTCAACCTGCAAGAGAACCCTGATGGCTCATCATCCTCTTCGTCAAATGTTGTCGAAGGCGAGTTCGAAGAAGTAAACTTGCTAGACAATAACAACAACGGCATGGCTGCAAATTATAAGAACCTAAGCCTTGGGAGTGAGCATGAGGTTAGCCAATAA 2547 0.4146 MHAINALVSLLCTLVLLNSLIHASSKDSDPLILGCGLGEGGGKDDDGREWLPDNKYVSGGNSITSKALFQDPSLLSVIPYMTARIFTSEATYKFPVQPDKRYWLRLHFYPSVYDSYNPSNSYFSVTANGVTLLSNFSASITCQALSQAYLDREYSLAPLNSDTLTLVFKPSDKYNGAFAFVNGIQLMQMPELFDSASLVGYADQTVDAKSLHLQTMFRLNVGGQYISPNQDSGLSRMWYDDTPYIYGAATGVTNQVAKDVKIDYQTMAQYIAPSSVYSTSRSMGNNKDINMGYNLTWIFQVDPNSMYLTRLHFCDYYYSKVNEIVFNIYVNNQSAQAQADVIGWTGGKGVPTYKDYVVYVQDQAGEDTLWLALHPAPDTKPEYYDAILNGVEIFKLNDTNLSGPNPQPSEMMVEHEEEKKFEEKDTHYSKTSVIGGAAGSAIGVALVTAICIVVHKKKMSPGSYSHNSSWLPLYGNSQLSGNSKSTISGKSTVGSTNLSAMAQGLCRYFSLQEMKQATKNFDEANVIGVGGFGKVYKGVIDNGLKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDEEMCLVYDFMALGTMREHLYKGNKPISTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENFVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLAEWALTCKRKGALDDIIDPSLKGKINPESLKKFADTAEKCLSDHGLDRPSMNDLCWNLEFALNLQENPDGSSSSSSNVVEGEFEEVNLLDNNNNGMAANYKNLSLGSEHEVSQ* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0711 848 ProSiteProfiles Protein kinase domain profile. 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0711 848 Gene3D Phosphorylase Kinase; domain 1 482 596 - -
Lan20g0711 848 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Lan20g0711 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Lan20g0711 848 SMART serkin_6 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0711 848 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 843 - -
Lan20g0711 848 SUPERFAMILY Protein kinase-like (PK-like) 497 796 IPR011009 -
Lan20g0711 848 CDD STKc_IRAK 527 789 - -
Lan20g0711 848 PANTHER OS07G0166700 PROTEIN 20 843 IPR045272 GO:0004714|GO:0006468
Lan20g0711 848 Pfam Malectin-like domain 34 395 IPR024788 -
Lan20g0711 848 Gene3D - 211 397 - -
Lan20g0711 848 Gene3D - 35 190 - -
Lan20g0711 848 Pfam Protein tyrosine and serine/threonine kinase 525 788 IPR001245 GO:0004672|GO:0006468
Lan20g0711 848 Gene3D Transferase(Phosphotransferase) domain 1 597 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0711 Lan-Chr20 5792739 5796136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0711 19 843 Receptor kinase-like Gene Family AT3G51550 53.510 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan20g0711 Malectin_like 1.9e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0711 - - gmx:100815737 1315.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0272 8 4789822 4793167 Lan20g0711 20 5792739 5796136 LSH
Lan19g0605 19 11334044 11336915 Lan20g0711 20 5792739 5796136 PCT
Lan20g0711 20 5792739 5796136 Lan19g0605 19 11334044 11336915 PCT