Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0704 ATGGATCGTGTCTTCTCAGTCGGCGAAATCGCCGACCACTTCTGGTCGCCGGCGATTCCCTCATCCCTCTCCTCCGGCGGCGCCGACGAATCTTCTAAGATGAATCGCAGCGCTTCCGAGTGGGCCTTCCAGCGTTTCCTTCAAGAAGCAACATCCGCAACATCTCCACTTTCTTCTTCATCCGTTGCTGATCGAAACGACGACGTCGTTCTCGTCGAGACCAATAGCCACCAATCTAAACTGGATCGTGCACAGAGCGTGGACACCACGCTCCTTCAGAAAAACGATGTCGTTTTGCAAAATGCGATTTCTGTTCCTCCTCCTGGGCCCGTTGGTTCAGAGGAGTACCAAGCTTTCCTTAAGAGCAAGCTCAATCTCGCATGCGCTGCAGTTGCCATTGCCAGGGGGTCTTTGATCAAATCTCAAGATCAAGCCACTTTTCCTGACAGTGTACCACAGCCACTGTCTAATCTTTCTCAACCTGGACCTCAGCCTAATTTTACAGGTTCTGGTCCTTCTGGAAGTGACCCACCTAAATTGCAAGAGAAAGATGCCAAAGCACCAGTTGGGATTCCTTCTATACCTGCCATGCAAAAGAAACCCTCTGTTGCCATCAGGCCATCAACAAGTGGATCATCAAGAGAACTGTCAGATGACGAGGACATGGACGGAGAGACAGACATGAATGATAACATGGACCCTGCTGATGTAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCAGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACCGATCTGGAGACACAGGTGAATCAATTACGAGGTGAAAACTCTTCCTTGTTAAAGCGCCTTACTGATGTCAGCCATAAGTACAATGAATCTGCTGTTGACAACAGAGTATTGAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAAACTGTAAAAAGAATTACTGGGTTGAACCCAATGTTTCATGCCATGTCTGATATATCAACCATGAACATGCCTTCATTTGATGGAAGTCCGTCTGACACATCAGCCGATGCAGCTGTCCCTGTGCATGATAATAACCCGAATCATCACTTTTATCAACAACCCACATCTAATAATCCTATACCCAGTCATGACATGAGAGTGATCAATAATGGGTTGGGGGACATTCCTTCTTCAATTGAAAATGTGCAGCAGAATGCTGCTGCAGCAGTGACTGTAGGGAGCAAGGTTGGTCAACCAGCTTCCTTGCACCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTCGATTCTACTGGACCATCTTCCAACGGAGAGCAGCAGTAG 1341 0.4765 MDRVFSVGEIADHFWSPAIPSSLSSGGADESSKMNRSASEWAFQRFLQEATSATSPLSSSSVADRNDDVVLVETNSHQSKLDRAQSVDTTLLQKNDVVLQNAISVPPPGPVGSEEYQAFLKSKLNLACAAVAIARGSLIKSQDQATFPDSVPQPLSNLSQPGPQPNFTGSGPSGSDPPKLQEKDAKAPVGIPSIPAMQKKPSVAIRPSTSGSSRELSDDEDMDGETDMNDNMDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVNQLRGENSSLLKRLTDVSHKYNESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFHAMSDISTMNMPSFDGSPSDTSADAAVPVHDNNPNHHFYQQPTSNNPIPSHDMRVINNGLGDIPSSIENVQQNAAAAVTVGSKVGQPASLHRVASLEHLQKRIRGGVDSTGPSSNGEQQ* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0704 446 SMART brlzneu 234 298 IPR004827 GO:0003700|GO:0006355
Lan20g0704 446 MobiDBLite consensus disorder prediction 144 175 - -
Lan20g0704 446 SUPERFAMILY Leucine zipper domain 238 288 IPR046347 GO:0003700|GO:0006355
Lan20g0704 446 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 291 IPR004827 GO:0003700|GO:0006355
Lan20g0704 446 PANTHER BZIP TRANSCRIPTION FACTOR 1 426 - -
Lan20g0704 446 Coils Coil 254 281 - -
Lan20g0704 446 PANTHER BASIC LEUCINE ZIPPER 63 1 426 - -
Lan20g0704 446 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Lan20g0704 446 CDD bZIP_plant_GBF1 239 290 IPR045314 GO:0003700|GO:0006355
Lan20g0704 446 Pfam bZIP transcription factor 237 289 IPR004827 GO:0003700|GO:0006355
Lan20g0704 446 Gene3D - 237 293 - -
Lan20g0704 446 MobiDBLite consensus disorder prediction 144 238 - -
Lan20g0704 446 Pfam Basic leucine-zipper C terminal 305 434 IPR020983 -
Lan20g0704 446 Coils Coil 296 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0704 Lan-Chr20 5727221 5732314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0704 1 327 bZIP Transcription Factor Family AT4G02640 41.124 1.94e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan20g0704 bZIP_C 6.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0704 K25784 - gmx:100170702 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0493 4 7472131 7481081 Lan20g0704 20 5727221 5732314 PCT
Lan20g0704 20 5727221 5732314 Lan4g0493 4 7472131 7481081 PCT