Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0701 ATGATTCGTACATTTCTCATTGCAAGATTAACTGCATCATCATTCACTCAGCGCAGCCGCACCCAAATCCAATTGGGTTCTCTGCTGCCATACAATGCTTTTATTTTCTTTAAGTCATTCACCTCAGGAACTTCTTTGAAATCTGAATCACAAACAAATCACCATAAATTTCACAACTTTACTGTTTCTTACCTCATCAATTCATGTGGGTTGTCTCCTGATTTGGCTCTCAAAATCTCCAAAAAGATTAAATTGAAAAACCAAGATGGGCCAGATGTTGTTCTTGATCTACTCAAGAATTACGGGTTCTCCGAAAAGCAGTTATCTATCTTGATCAAAAGATTACCCTCAGTGCTTTTAGCTGAACCTGACAAGACCCTTCTCCCAAAACTCAAGTTCTTTCAATCTATTGGGATGTCAGAAATTGACCTTCCCAGAATCATCATCGGAAACTGTTCACTATTAACACTAGGCTTGAAGAACAACATTATCCCTCGTTATAACATAATCAGGAGTCTCCTTCGCAGTGATGAGGAAGTAGTTTCAACTTTGAAGCATGGGCCGAGGTACTTTCACGGTTATGAGGTAATAAATGATTCAGTTCAGAACATAGAGGTTTTGAGACGGCTTGGCTTGCCTCAAGGTTCAATCTCTCTATTAGTAACCAATTTCCCTAGTGTAGTGTTTATGAAGCATTCAAGATTCAATGAGGCTGTCGAGGCAACGAAAGAAATGGGGTTTGATCCCATGAAAACAAATTTTGTTTTGGCACTTCAAGTACTTGCAAAGATGGATAAGGCAATGTGGAAAGCGAAATTAGAGGCTTTCCAGAGGTGGGGTTGGTCCAAAGATATTTGTCTTGTGGCTTTCAAAAAGTATCCCCAGTATATGATGATTGCAGAAAAGAAGATTATGAAAACACTGAGCTTCTTGGTAGAGAATATGGGTTGTTCCTTAGAAGACATTGCTAGATGCCCGGGGATTTTGAACCGCAACCTGGAGAAGACATTTATCCCTAGATGTGCAGTTGTTAAAGTTTTGAAGTCAAGCGGTTTGGTAAAGAATGATTTGCACATAGGTACCTTTATGATACTTTCTGAGAAAAAGTTTTTGGAGAAATATGTGACCCGATTTCAGAAAATTGTGCCTCTACTATTGGATGTGTATGAAGGTAAAAAAGTTGGCTTGATCATTTGA 1197 0.3885 MIRTFLIARLTASSFTQRSRTQIQLGSLLPYNAFIFFKSFTSGTSLKSESQTNHHKFHNFTVSYLINSCGLSPDLALKISKKIKLKNQDGPDVVLDLLKNYGFSEKQLSILIKRLPSVLLAEPDKTLLPKLKFFQSIGMSEIDLPRIIIGNCSLLTLGLKNNIIPRYNIIRSLLRSDEEVVSTLKHGPRYFHGYEVINDSVQNIEVLRRLGLPQGSISLLVTNFPSVVFMKHSRFNEAVEATKEMGFDPMKTNFVLALQVLAKMDKAMWKAKLEAFQRWGWSKDICLVAFKKYPQYMMIAEKKIMKTLSFLVENMGCSLEDIARCPGILNRNLEKTFIPRCAVVKVLKSSGLVKNDLHIGTFMILSEKKFLEKYVTRFQKIVPLLLDVYEGKKVGLII* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0701 398 Pfam mTERF 95 248 IPR003690 GO:0003690|GO:0006355
Lan20g0701 398 Pfam mTERF 264 371 IPR003690 GO:0003690|GO:0006355
Lan20g0701 398 PANTHER CGI-12 PROTEIN-RELATED 38 392 IPR003690 GO:0003690|GO:0006355
Lan20g0701 398 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Lan20g0701 398 SMART mt_12 218 248 IPR003690 GO:0003690|GO:0006355
Lan20g0701 398 SMART mt_12 109 140 IPR003690 GO:0003690|GO:0006355
Lan20g0701 398 SMART mt_12 319 353 IPR003690 GO:0003690|GO:0006355
Lan20g0701 398 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Lan20g0701 398 Gene3D Transcription termination factor 3, mitochondrial 199 382 IPR038538 -
Lan20g0701 398 Gene3D Transcription termination factor 3, mitochondrial 72 198 IPR038538 -
Lan20g0701 398 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 38 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0701 Lan-Chr20 5689822 5691018 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan20g0701 mTERF 2.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0701 K15032 - gmx:106799612 426.017