Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0695 ATGTTTGATGGAGTACCAGACCAGTTCCATCAATTCATAACACAAAGGACTTCACTTCCTCTTCACTTACCTTTCCCTCTTCATTCTTCAGCTGTACCAAGCAATAGCAGCTTCCCTTCTTTTGATCCTTATAACCCATCTTCTCATCAATTGCCACTTCAACTCCAACCCAATCTCTTGCACCAATTACAGCACCAACACCAAGCTTCTATCCACAAAGAACATGGAGCTGAGAAGGAAGAACATGGTACTGTGCCAATGAACTTTGAAGTTGATCAAAGAGATCAAAATATTGATCTTTGGACTAATGATGAAGTGCTTGCACTTTTGAGGATCAGATCTAGCATGGAGAGTTGGTTCCCAGAGCTCACTTGGGAACATGTCTCAAGGAAGCTAGCAGAGCTTGGATATAAGAGGAGTGCAGAGAAATGCAAGGAGAAGTTTGAAGAGGAAAGCAGATATTTCAACAACATTAACTACACCAAGAATAATAATAATAATAATAATAATAATAATTATAGGTTTCTTAGTGAGCTTGAAGAGCTTTATAATCAAGGTGATAATCATCGAGTTGCTGGGAGTGAAAAACCAATAAGCATAGAAGGACAAGACAAGATCATGGACCTAGAAGAGGATTCAACAAAACAAAAGGTGCAAGATGATGATGATGAAGAAGATGTGGTTGTGGAAAAACCAAAGGAGGACATGAGGGCTAAGAGGAAGAGGCCAGATAGGTTTGAAATGTTTAAGGGTTTTTGTGAGAGCATTGTGCACAAGATGATGGAGCAACAAGAAGAGATGCACAACAAATTGATTAAGGATATGATGAAGAGAGATGAAGAGAAGTTTGCAAAGGAAGACGCTTGGAAGAAGCACGAGATGGATAGGATGAACCAAGAGCTTGAGATTATGGCACAGGAACAAGCTATTGCTAGTGATAGACAAGCCAATATGATTGAATTCTTGAACAAGTTCTCAGCAACCACTTCTTCCCCTATTTCAAGCCAAATCAAGGTAACAAATGTTTCAAACCCAAACACTTGCACTACTACTCCTTCTTCACCACCATCACAAAACCCTAATCCTTCTATTATGGTCCTAAATAATCATGTAAATAATGTTTCTTCAGAAGTAGAAAACCCTAGCTCTATTCCTTCCCAAGAAACATTACAAAATGCTTCTTCTACTACTTCACCTCCAATTATCCAGAACCCTAGTTCTTCTTCTCTCAATAGGCAGAATAATACAAATCCAGTTTCAAATAAAGCCTCCTCACTTGTTATTGTTGAGAAAGATGGTGTTGGGAGAAGATGGCCAAAAGATGAAGTTTTAGCACTGATAAATCTCAGGTGCAATAGCTTAAACAATAACAACAATGAAGAGATGGAAGGAAACAAAGCTCCATTGTGGGAGAGAATCTCACAAGGAATGTTGGAGTTGGGATATGAGAGAAGTTCAAAGAGATGCAAAGAGAAATGGGAAAACATAAACAAATATTTCAGAAAAACAAAAGATGTTAATAAGAAGAGATCACTTGATTCCAGAACTTGTCCTTACTTCCACCAATTGAGCAATCTGTATAATCAAGGAAAACTTGTTTTACAATCTGAAAAGCTAGAAAATCAGTTGAGTCCACAAGCAAATACTGTGGGAGTGAGTACACCAGATCAAAATCAAAGCAAATTAGCTGAGTCTTCTTCTCAGGTGGGGTCTGGTGGTTTCAGTGTTGATCATCATGTAGGTGAGAAAACTTTGGTGCACGTACCTTCTTTGGATTTTGATCAGTTTTAA 1791 0.383 MFDGVPDQFHQFITQRTSLPLHLPFPLHSSAVPSNSSFPSFDPYNPSSHQLPLQLQPNLLHQLQHQHQASIHKEHGAEKEEHGTVPMNFEVDQRDQNIDLWTNDEVLALLRIRSSMESWFPELTWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNINYTKNNNNNNNNNNYRFLSELEELYNQGDNHRVAGSEKPISIEGQDKIMDLEEDSTKQKVQDDDDEEDVVVEKPKEDMRAKRKRPDRFEMFKGFCESIVHKMMEQQEEMHNKLIKDMMKRDEEKFAKEDAWKKHEMDRMNQELEIMAQEQAIASDRQANMIEFLNKFSATTSSPISSQIKVTNVSNPNTCTTTPSSPPSQNPNPSIMVLNNHVNNVSSEVENPSSIPSQETLQNASSTTSPPIIQNPSSSSLNRQNNTNPVSNKASSLVIVEKDGVGRRWPKDEVLALINLRCNSLNNNNNEEMEGNKAPLWERISQGMLELGYERSSKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSNLYNQGKLVLQSEKLENQLSPQANTVGVSTPDQNQSKLAESSSQVGSGGFSVDHHVGEKTLVHVPSLDFDQF* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0695 596 ProSiteProfiles Myb-like domain profile. 101 152 IPR001005 -
Lan20g0695 596 Gene3D - 101 157 - -
Lan20g0695 596 Gene3D - 438 502 - -
Lan20g0695 596 PANTHER - 13 589 - -
Lan20g0695 596 MobiDBLite consensus disorder prediction 340 422 - -
Lan20g0695 596 ProSiteProfiles Myb-like domain profile. 437 497 IPR001005 -
Lan20g0695 596 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 13 589 - -
Lan20g0695 596 Pfam Myb/SANT-like DNA-binding domain 100 180 IPR044822 -
Lan20g0695 596 Pfam Myb/SANT-like DNA-binding domain 436 525 IPR044822 -
Lan20g0695 596 MobiDBLite consensus disorder prediction 547 574 - -
Lan20g0695 596 MobiDBLite consensus disorder prediction 547 573 - -
Lan20g0695 596 MobiDBLite consensus disorder prediction 212 240 - -
Lan20g0695 596 CDD GT1 436 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0695 Lan-Chr20 5650139 5652527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0695 1 529 Trihelix Transcription Factor Family AT5G28300 38.779 2.91e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan20g0695 Myb_DNA-bind_4 6.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0695 - - gmx:100804367 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0281 8 4892552 4895203 Lan20g0695 20 5650139 5652527 LSH
Lan20g0695 20 5650139 5652527 Lan4g1322 4 22039410 22042264 LSH
Lan4g0497 4 7503300 7506015 Lan20g0695 20 5650139 5652527 PCT
Lan20g0695 20 5650139 5652527 Lan4g0497 4 7503300 7506015 PCT