Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0685 ATGGCTTTTTCCCAAGATATGGCTCCTCCTCCCTGTCTAATATTCACTGTTAGGAGACACCAACCAGAGTATGTAACTCCCGCTAAGCCTACTCCTCATGAAATCAAGCCACTTTCTGACATAGATGACCAACAAGGTTTGCGTATCCAAATTCCATTCGTACAAATCTACCGTAATGAACCTTCAATGGAAGGAAAAGACCCAGTTGAAGTCATTAGACAAGCACTTGCACAAACACTTGTGTTCTACTACCCATTTGCAGGTAGACTTAGGGAAGGTGCTGACCGAAAACTCATGGTGGATTGTAATGAAGAAGGTGTGTTGTTTGTTGAGGCTGATGCAGATGTAACACTTGAGCAATTTGGTGATTCTCTTCAACCTCCTTTTCCATGTTTTGAAGAACTCCTTAATGATGTTCCAGGCTCAGAAGGAATTCTTCACACTCCCCTTCTGCTAATACAGGTTACACGCCTCAAGTGTGGTGGTTTCATCGTTGGCATGCGGTTTAATCACACAATGATTGATGGAGTTGGCATATTACAATTCATGACCGCCTTGTCAGAAATGGCTCGAGGTTTAGATGAACTTTCAATCTCACCTGTGTGGGATAGAGAACTCCTATGTGCAAGGAATCCACCTTGTATTACATGCAATCATCGTGAATACGAGGAAGTACCTAGTACTGACTCCATCAAAGTTCCATCATCCGATGATAACGGTAACTTGGTTCACAAATCTTTCTTCTTTGGACCCAATGAGATAGCAGCAATTCATGGCTTGCTTCCCACTCATTTTGGTCGATGCACCACTTTTGAGGTTCTTACAGCATATGTATGGCTTTGTCGAACAAAAGCACTGCAATTGGAATCACACGAGGTTGTTCGAATGATGTGCATCGTCAACGCACGTTCTAAGTTTAACCCTATATTACCTATTGGTTATTATGGAAATTGTATTGCATACCCTGCAGCAGTCACTACAGTACACAATCTCAGTGAAAACCCATTTGAGTATGCAGTGGAATTGATTAAAAAAACAAAGGTTGAGGTGACTGAAGAATATATGCATTCTTTGGCAGATTTAATGGTTATTAAGAAACGACCCTTATTTACAATACCTGGAACTAGCATTGTATCAGATGTAACACGTCTTGGGTATAGAGATGTGGATTTTGGATGGGGTAAGTCTTTATATGGTGGACAAGCTAAAGCTGGAGCAGGTTCCTTTTTTGGAGCACACTACCATGTCTTGAGTAAAAATTCAAGAGGGGAAGATGGCATGGTAGTACTAATTTGCTTGCCTACCAAAGTTATGAAAAGATTTGCAAAAGAATTGGTCGATGGCTTTCTTGATAGGCAAAGCAAAAATAACTGA 1374 0.4098 MAFSQDMAPPPCLIFTVRRHQPEYVTPAKPTPHEIKPLSDIDDQQGLRIQIPFVQIYRNEPSMEGKDPVEVIRQALAQTLVFYYPFAGRLREGADRKLMVDCNEEGVLFVEADADVTLEQFGDSLQPPFPCFEELLNDVPGSEGILHTPLLLIQVTRLKCGGFIVGMRFNHTMIDGVGILQFMTALSEMARGLDELSISPVWDRELLCARNPPCITCNHREYEEVPSTDSIKVPSSDDNGNLVHKSFFFGPNEIAAIHGLLPTHFGRCTTFEVLTAYVWLCRTKALQLESHEVVRMMCIVNARSKFNPILPIGYYGNCIAYPAAVTTVHNLSENPFEYAVELIKKTKVEVTEEYMHSLADLMVIKKRPLFTIPGTSIVSDVTRLGYRDVDFGWGKSLYGGQAKAGAGSFFGAHYHVLSKNSRGEDGMVVLICLPTKVMKRFAKELVDGFLDRQSKNN* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0685 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 448 - -
Lan20g0685 457 Gene3D - 224 445 IPR023213 -
Lan20g0685 457 Pfam Transferase family 20 444 - -
Lan20g0685 457 PANTHER ALCOHOL ACYLTRANSFERASE 15 448 - -
Lan20g0685 457 Gene3D - 16 223 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0685 Lan-Chr20 5463204 5465429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0685 48 447 Monolignol Biosynthesis Gene Families AT5G48930 32.439 9.33e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0685 K19861 - gmx:100792864 585.874