Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0681 ATGCTCACTTCTACAGCAGAAATGCCATCAGAAAATGAAAGTGAGGTTTTGAAATCATCATTGGAATCAAGCCCAGATTCCATTGATGGATACCCACCAGTTTCAACCGTTTACACTGATGTGGGTGTGGTGCCAGAGCAAGAAAAGAAGGAGCTTCAGCATTTGATTTCTAACTTAGAAAGAGAAATGGAGCAGCTAAAGCTGAAACAAAAGATGTTGTATGAGAAACGTAGAGAAGCATTGAATAAAATATTTGACATCAAAGGCAGTATTAGAGTATTTTGTAGAATTCGACCAATTGTGTTAGCGGATAAGAGAAGAATTTCTGAACCAGTTTCAGCTGGATCAGAGAGGGTTCGGGTTAAGTTTGGAGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTTACTCAAGAAGTGAGCCAAGAAAGTGTTTTTGTTGAGATCGAGCCAATTCTTAGATCCGCGATAGATGGGCACAATGTTTGTGTTTTTGCTTATGGTCAAACTGGCACTGGCAAGACATTCACAATGGATGGAACGGATGAGCATCCTGGAATTATTCCGCGTGCACTTGAACAACTCTTTCATCAAGCCTCTTTGCATTGTTCATCTTCTTTTACATTTTCAATGAGCATGTTGGAGGTTTACATGGGCAATATCAGGGATCTCTTGGCTCCAAGACCAAATGGTAGAGCATATGAACCTATCACAAAATGCAATCTCAACATCCAAACAGATCCTAAGGGATTGATTGAAATTGAGGGGCTAACGGAAGTGCAAATTTCAGATTATGCTAAAGCCAAATGGTGGTACAACAAAGGTAAACGGTTCAGATCAACATCATGGACTAATGTCAATGAGGCATCAAGCAGGTCACACTGCTTGACGAGGATAAACATTTTTCGACGTGGGGATGCTATGGAAAGGAAAAGCCAATTGAGTAGATTGTGGATGGTTGATCTTGGAGGCAGTGAACGGTTGCTTAAAACTGGAGCCAAAGGACTAACACTCGATGAAGGCCGAGCCATTAATCTTTCTCTTTCAGCTTTAGCAGATGTCATCGCAGCTTTGAAGAGGAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTGACTCAAATACTGAAAGACTCTCTTGGTGATGGATCAAAGGTCTTGATGCTGGTGCATATAAGACCTTCCGAAGAAGATGTTTGTGAGACAATTTGTTCGTTGAACTTCGCAAAAAGGGCGAGAGCAATAGAGTCGAGTAAAGAAATAGCAGTGGATTTGAAGAAGCAAAAGGAAAAGAAGATTATGGAGCTTGAAGAAGACATTAAGGAAGCCGAAAAACAACTGCAGAATACCAGGGGCCAGATACAGAATATTGAGTTCAAGTTAAGTGAGAGTAAAAATGAGGGCTCTATTAGTCCCAAAGATGATGTCAAGGAGATCATTGAAACTCCTAAAGCATCTAAGAAGTCTATTAAAAGAAATTTCTCCGGTTCATCAGTACCTCGATTCATGAATCCGACCGTTGCTAGTCGCCAAAGGCAGAGTACTGCAGGTCGAGACAGTATTGGTGGGAGATCAAAAGATTTAAGATCAGTTGTCGCCCTAAGTTCAATACAGCTTTCATGTTCTCAATCATTAAGTTATTCAGATATCCGCATTAAAGGGTTGCTGCGAAGTTCAAATGGAAAATCTAGACATGCTGAGACAAATACTGTTCTCGCTGAGACGCCTAAAGGCATTGAATTGGAATCAAAAACTTCAAATCCTCGAAGCAAGATGGTTACATCGTCGGATCCAAATTTGAGAGTTAAATTGTGCCGTCATAGAAGAAGGATGTCTAACCTGATCTAA 1848 0.4058 MLTSTAEMPSENESEVLKSSLESSPDSIDGYPPVSTVYTDVGVVPEQEKKELQHLISNLEREMEQLKLKQKMLYEKRREALNKIFDIKGSIRVFCRIRPIVLADKRRISEPVSAGSERVRVKFGGTRKDFEFDKVFTQEVSQESVFVEIEPILRSAIDGHNVCVFAYGQTGTGKTFTMDGTDEHPGIIPRALEQLFHQASLHCSSSFTFSMSMLEVYMGNIRDLLAPRPNGRAYEPITKCNLNIQTDPKGLIEIEGLTEVQISDYAKAKWWYNKGKRFRSTSWTNVNEASSRSHCLTRINIFRRGDAMERKSQLSRLWMVDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVIAALKRKRCHVPYRNSKLTQILKDSLGDGSKVLMLVHIRPSEEDVCETICSLNFAKRARAIESSKEIAVDLKKQKEKKIMELEEDIKEAEKQLQNTRGQIQNIEFKLSESKNEGSISPKDDVKEIIETPKASKKSIKRNFSGSSVPRFMNPTVASRQRQSTAGRDSIGGRSKDLRSVVALSSIQLSCSQSLSYSDIRIKGLLRSSNGKSRHAETNTVLAETPKGIELESKTSNPRSKMVTSSDPNLRVKLCRHRRRMSNLI* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0681 615 PRINTS Kinesin heavy chain signature 159 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0681 615 PRINTS Kinesin heavy chain signature 284 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0681 615 PRINTS Kinesin heavy chain signature 316 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0681 615 PRINTS Kinesin heavy chain signature 365 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0681 615 PANTHER KINESIN-LIKE PROTEIN KLP-3 18 610 - -
Lan20g0681 615 MobiDBLite consensus disorder prediction 487 523 - -
Lan20g0681 615 MobiDBLite consensus disorder prediction 1 30 - -
Lan20g0681 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 415 IPR027417 -
Lan20g0681 615 Coils Coil 419 467 - -
Lan20g0681 615 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 18 610 - -
Lan20g0681 615 MobiDBLite consensus disorder prediction 489 520 - -
Lan20g0681 615 ProSiteProfiles Kinesin motor domain profile. 90 415 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0681 615 Pfam Kinesin motor domain 122 415 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan20g0681 615 Coils Coil 49 83 - -
Lan20g0681 615 MobiDBLite consensus disorder prediction 1 31 - -
Lan20g0681 615 Gene3D Kinesin motor domain 85 460 IPR036961 -
Lan20g0681 615 SMART kinesin_4 88 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0681 Lan-Chr20 5417208 5421246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0681 11 422 Calmodulin-binding Proteins AT5G65930 36.092 7.33e-71 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0681 - - gmx:100785581 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0290 8 5008689 5012658 Lan20g0681 20 5417208 5421246 LSH