Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0662 ATGGAAGTCGATACTACTACAGAGAACCATACTTACACACGACAACACTCGCATTCGGAAAACCATAACCATCACCATGGCCATTTCCCCACCAAAACCATTGTCATAACTATCACAACAGTCACCACAGTTACAATCCTACTTACCATTTTTCTGGTCATATTCTTGCTCCGTCGGCAAAAATCTTCTACCAAGAATGAAACTTGCAAAGATAAGAGTAGAGTGCTACATGACACAAGCAGCAAGCTCATTGCTTCAACAACCTTAACCTTCACTTCTAGCCCAGATGTGAAAAGAGGGTGTCTTCATGGTGGAAATTTAAACAGGACGCCAGTACCTAAATTTAGGGGGGTCCAAGTTTTCACATACAAGGAACTAGAAGTGGCCACAGATGGATTCAGTGAAGCAAAAGTGATTGGTAATGGAGGGTTTGGTTTGATGTATAAAGGGGTCCTAAGTGATGGCACTTTGGCAGCAATTAAATTGTTGAGCAGAGAAGGTAAACAAGGTGAGCGTGCCTTCAGAACAGAGGTTGATCTCCTAAGCCGCTTACACTCTCCTTATTTGGTGGAATTACTTGGCTATTGTGCTGACCATAACCACAGGCTATTGATATTTGAATACTTGCCCAATGGCACACTCCATAACTATATTCACTCCTCCAACAATCAAACTCAACCGTTGGATTGGTGGGCCCGGCTGAGGATAGCCCTTGATTGTGCCAGGGCATTGGAGCTTCTGCATGAACATGCTGTTTCACCTGTAATCCACCGAGACTTCAAAAGTAACAACGTTCTACTGGACCATAATTTCCGTGCCAAGGTGTCAGATTTTGGATTGGTAAAGATGGGATCAGAGAAGATGAACGGCCAGGTTTCCACCCGTGTGTTAGGGACCACTGGATATTTGGCACCAGAGTATGCATCCACAGGCAAACTTACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTGGAACTGCTAACGGGACGTGTTCCAGTTGATATTAAGCGAGCCCCAGGAGAGCATGTCCTTGTAGCTTGGGCTCTTCCAAGGTTAACAAACAGAGAAAAGGTGGTGGAAATGGTTGATCCAGCTCTACGTGGACAGTACTCTAAGAAGGATTTAATTCAGGTAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCCCTCATGACAGATGTCGCACAATCACTAATACCACTTGTTAGGAACCCATCTTCTCTTGGCTCATCAAGTTCCCTGAGATTTCAAAGACAAACACCTAGTCCTAGTCCCAGTCATTAG 1308 0.4465 MEVDTTTENHTYTRQHSHSENHNHHHGHFPTKTIVITITTVTTVTILLTIFLVIFLLRRQKSSTKNETCKDKSRVLHDTSSKLIASTTLTFTSSPDVKRGCLHGGNLNRTPVPKFRGVQVFTYKELEVATDGFSEAKVIGNGGFGLMYKGVLSDGTLAAIKLLSREGKQGERAFRTEVDLLSRLHSPYLVELLGYCADHNHRLLIFEYLPNGTLHNYIHSSNNQTQPLDWWARLRIALDCARALELLHEHAVSPVIHRDFKSNNVLLDHNFRAKVSDFGLVKMGSEKMNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVAWALPRLTNREKVVEMVDPALRGQYSKKDLIQVAAIAAMCIQPEADYRPLMTDVAQSLIPLVRNPSSLGSSSSLRFQRQTPSPSPSH* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0662 435 ProSiteProfiles Protein kinase domain profile. 133 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g0662 435 CDD STKc_IRAK 139 409 - -
Lan20g0662 435 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 6 431 - -
Lan20g0662 435 MobiDBLite consensus disorder prediction 416 435 - -
Lan20g0662 435 SUPERFAMILY Protein kinase-like (PK-like) 114 406 IPR011009 -
Lan20g0662 435 MobiDBLite consensus disorder prediction 1 28 - -
Lan20g0662 435 MobiDBLite consensus disorder prediction 1 18 - -
Lan20g0662 435 Pfam Protein tyrosine and serine/threonine kinase 136 406 IPR001245 GO:0004672|GO:0006468
Lan20g0662 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lan20g0662 435 PANTHER OS01G0750732 PROTEIN 6 431 - -
Lan20g0662 435 Gene3D Phosphorylase Kinase; domain 1 106 208 - -
Lan20g0662 435 Gene3D Transferase(Phosphotransferase) domain 1 209 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0662 Lan-Chr20 5234596 5238418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0662 101 434 Receptor kinase-like Gene Family AT3G58690 60.997 1.35e-149 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lan20g0662 PK_Tyr_Ser-Thr 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0662 - - gmx:100499645 674.085