Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0646 ATGGGTTATGGTTATGAGTTTCTTACCATGATCTTCATCATGACCCTCTTCATGTTCCTATCATTACAAAGAATCCACATTTTAAATGTGGATGATATGCTCATAGAGATGGAGGAGAAGGAGAAGAATGAGCAAGGAAATGAAAACCAAGTTAAGAAAATCTCAGGACTTGATGAGAATGAAATGAAGGAAGCTATGATAGTTGAAAAGTTTAGAGCTTTGCTTGGACTTAAGAGTTTTCATACAAAACTACCATCTCAGTTTCTTTCACCATCAATTTCACCTTCTCCATCACCCAACATAGAACCTTATTCTCCAGCTCCAACACCTTCTCCAATAGTACCACAAATTCACTCTCATTCACATCATCCAAGGCATCATCATTCTCATTGGAATCCACCACTTCACAACAACAAAACTCATGCTAAAGAAGATAGAGGCAAAGATAAGAGAATAATACTAGTAGCTGTTCTTGTTTCTGTGGGAGTTGCTACATTAGTTTGTGCTTGTGGCTTAATCTTAGTCTGCAGGAACTTCAGAAATAACAGAAAGAAGCCAAATAGGAAAATTCCATTGTGTACCAAGAACAAAGGAACTGATGGAGTTACAAGTACTTATCAAAATTCATCAAGCAAGGTGAGTTCAAACTCTGAGGGGTTAGATCTGTCTTATGTTAATGCTTTAGGTGATGATATAGAACAACAAGGGTGTACCTCCAAAAGAATTTGTAAGAATAACATTGAAATTTATGATAATGTTAGTAGTTCTTCTACTAAGGAAATTCTATTTGTCCATGAAGATGAGGGAAAATCAGTAGTAAAAGGTGAATATGAATCTGATGGCAATGACAATGAAAACTCTTGTTCTAAGGATAAAATTATCCCTTTAGAAGAAGAATATCATTCATCAGATGATGAAAGTTTTCATTCCCTTGTTGATTCACAACATTCAAATATAAGACTTTCTAATGCTTCAGCTGGTAGCTTTTGTGAAACAATGTCTATGTCCCCTCAAAATTCAACTTTATTAGTATCATTACCAAACCAATTTCCTACTTCCCCTAATGGCTCATTTTCAAAGACAAGATCTCACCAATCACCATATAGTCCAATACATGAAGAACAAGAGATTTTTGAAACCTCTCCTAAAATTCTCATTCCTCCACCACCACCTCTACCCCTTAAAATGCCACTCTTCACTTTGCATTCTCTTACTACTTCCTCATCAAGAGTTTCCTCTAACTCTCCACATTCTGTGACATCTCATATTTTATCATCTCCAAGAAATTCAGATACTTATTCAGTATCCAATCCAAGTCCAGAAAAACAGTTTCTTTCACCACCTCAACTTAACTCTACAAAATCTTCACCCAATATTCCACCACCACCATGTCCCCCTCCATTTTTCAAAGGCAACAAAATCAATAACAATAGCAAAACACCACCTCCTCCACCATCTCAATTCCCTCATTTTACACCACTTTGTAAAGATGGAGCAACACTACCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCGAATCGAACAATGGTTTGGGACAAGCTAAGATCAAGTTCATTTGAGTTGGATGAGGAAATGATAGAATCACTTTTTGGGTACAATTTACAAAGTTCAATGAAGAATGATGAAACAAAGAGCAAAAGTCCATCACCAAGCAAGCATGTACTTGAGCCAAAACGGCTACAGAACATTACAATACTAAAAAAAGCTCTGAATTTGACATCTGAGCAAGTATGTCAAGCCTTAACACAAGGAAAGGGCTTGTCTTTGCCACAACTAGAGGCATTGGTGAAAATGGTACCCACCAAGGAAGAAGAGGGAAAACTCTTAAGCTACAATGGTGACATCAATGAATTGGGGTCAGCTGAAAAATTTGTGAGGGCAATGCTTATTGTGCCATTTGCCTTTCAAAGAATAGAAGGTATGCTTTACAGAGAGACTTTTGAAGATGAAGTTGTTCACCTCAGGAACTCTTTTTCAATGCTAGAGGAAGCATGCAAAGAACTAAGATCAAGTAGGTTGTTCTTGAAACTACTTGAAGCAGTGCTGAAAACAGGAAACCGCATGAATGTTGGAACAATAAGAGGAGGTGCTAGAGCATTTAAGCTTGATGCCCTTCTCAAACTAGCAGATGTTAAAGGAACTGATGGCAGAACAACCTTACTCCATTTTGTTGTTCAAGAAATCGTTCGCGCCGAAGGAATCAAAGTTTCAGTTAGCATCATGGGCAAAATCAGTCAAAAAAATAGCAAACTTAACAAAACAGAAGAAGAGAAAGAAGAAGATTACAAAAGAATGGGACTAGAACTAGTTTCTGGTCTCAGCACTGAGTTATACAATGTGAAAAAGACAGCTACTATTGACTTAGATGTTCTTGCTAGCTCGGTGTCGAATTTAAGAGATGGAATGGGTAAGTTGCAATATCTTGTGGAGGAGGAGTTGTTTAATGATGAAGAGAGTGAAAACTTTGTTAGTTCAATTAAGTGTTTCTTAAGTTATGCAGATAGAAACTTGAGGGAGTTGCAAGGTGATGAAGATAGAGTGATAGCAAGAGTGAAAGAGATTACTGAGTATTTTCATGGTGATGTGAGTAAAGAAGATAATCCACTAAGGATATTTGTGATTGTAAGGGATTTTTTGGGTATGTTAGATAATGTGTGTAAAGAGCTTAGAAGGTCTAAAGCTCATCGTACCCCAAATCCTCTTGCTCCATTCAGATAG 2751 0.3719 MGYGYEFLTMIFIMTLFMFLSLQRIHILNVDDMLIEMEEKEKNEQGNENQVKKISGLDENEMKEAMIVEKFRALLGLKSFHTKLPSQFLSPSISPSPSPNIEPYSPAPTPSPIVPQIHSHSHHPRHHHSHWNPPLHNNKTHAKEDRGKDKRIILVAVLVSVGVATLVCACGLILVCRNFRNNRKKPNRKIPLCTKNKGTDGVTSTYQNSSSKVSSNSEGLDLSYVNALGDDIEQQGCTSKRICKNNIEIYDNVSSSSTKEILFVHEDEGKSVVKGEYESDGNDNENSCSKDKIIPLEEEYHSSDDESFHSLVDSQHSNIRLSNASAGSFCETMSMSPQNSTLLVSLPNQFPTSPNGSFSKTRSHQSPYSPIHEEQEIFETSPKILIPPPPPLPLKMPLFTLHSLTTSSSRVSSNSPHSVTSHILSSPRNSDTYSVSNPSPEKQFLSPPQLNSTKSSPNIPPPPCPPPFFKGNKINNNSKTPPPPPSQFPHFTPLCKDGATLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQSSMKNDETKSKSPSPSKHVLEPKRLQNITILKKALNLTSEQVCQALTQGKGLSLPQLEALVKMVPTKEEEGKLLSYNGDINELGSAEKFVRAMLIVPFAFQRIEGMLYRETFEDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGRTTLLHFVVQEIVRAEGIKVSVSIMGKISQKNSKLNKTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLRDGMGKLQYLVEEELFNDEESENFVSSIKCFLSYADRNLRELQGDEDRVIARVKEITEYFHGDVSKEDNPLRIFVIVRDFLGMLDNVCKELRRSKAHRTPNPLAPFR* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0646 916 MobiDBLite consensus disorder prediction 89 108 - -
Lan20g0646 916 Pfam Formin Homology 2 Domain 500 893 IPR015425 -
Lan20g0646 916 MobiDBLite consensus disorder prediction 407 453 - -
Lan20g0646 916 MobiDBLite consensus disorder prediction 407 486 - -
Lan20g0646 916 ProSiteProfiles Formin homology-2 (FH2) domain profile. 494 916 IPR015425 -
Lan20g0646 916 Gene3D Formin, FH2 domain 517 910 IPR042201 -
Lan20g0646 916 PANTHER FORMIN-LIKE PROTEIN 9 916 - -
Lan20g0646 916 SUPERFAMILY Formin homology 2 domain (FH2 domain) 507 904 - -
Lan20g0646 916 Coils Coil 755 775 - -
Lan20g0646 916 MobiDBLite consensus disorder prediction 117 137 - -
Lan20g0646 916 MobiDBLite consensus disorder prediction 454 469 - -
Lan20g0646 916 PANTHER FORMIN-RELATED 9 916 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan20g0646 916 SMART it6_source 494 908 IPR015425 -
Lan20g0646 916 MobiDBLite consensus disorder prediction 119 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0646 Lan-Chr20 5111160 5115805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0646 10 916 FH2 protein (formin) Gene Family AT3G05470 46.494 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0646 - - gmx:100793761 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0646 20 5111160 5115805 Lan4g1293 4 21646823 21651526 LSH