Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0626 ATGGAGATTGAGAAAAAACGTTCAAAGGGAAGCTTCCTTAGCTTCTTTGACTGGAATGTGAAATCTAGAAAGAAACTGTTTTCTGACAATCCCAACTTACCTGAAGTTTCAAAGCAAGGAAAGGAAAATCTGGAGAACGTGCCAAAGTCACAGCTCAATAAGATGAATGTGCATGACAGTGGAGGAAATCCTAGTAATATTGCAAGTTGTGATGTTAACTATGCCTCATCAGTTAATAGTGATGAAGGGTGTGGAACACAAGCCCCAGGGCTAGTAGCAAGACTCATGGGTTTGGATTCATTGCCAGCTTCAACAGTCTCTGAGCTCTCCCTCTCCTCCACTTCATTATATGGTTCCAACTCTCTTGGATCTTCTCATTCTCATGAGGGTGATGATCTTCATTTGATGGATGACTATTACCCTATGGACTACATAAACATGCCACTTAAGGTGGAGAAATCTTCTTTGGTTGTTATGGAATCAAAGGCTCATAAAGTAGGAACAAAGAGATTTCAAAGTGAAATGTTGCCTCCAAAGTCAGCTAAACCTATTCCAGTTGCTCACAATGAACTTTTGTCTCCTGTCAAGAGCCATGGTTGTATACCACCTAAGAATGCAGTTCGTGTAAAAGCGGACACTAAGATAAATGAGGCAAGTTCGCTGCCATATATGAGGAATAGAATGTCTTCAGTTGGGCCTTCATCTGTTCCCGTAAAAAATCTTGATCCGACAGTAAAATCGGAAAGTGCTCAATATGTGCCCAAGCTCGTGGATCAGCACACTCCCAACCAAGGGAGTGACAAGTCTAGTGAGGAAAGCAATGATTTGTATAAATCCACTTCAACTTTCAAGGGTTCAAGAGATCCAGTAAACAATGGATCTCGCCATATAGTAAGTAAAGGAAAATCTGTTTCACTTCCAACTCTGTCCAAAGGTAGTGTTCAGAGAAGAGCCACGTCAATTTTGAATGGTAATAGGGGATATTTGAAGCAAAAAGAAAAGAACAAGATAAAACAAAACAAGTTATCCATGAGCCAGAAGAAAACAACTGCAGATCAGGCGAGGGTCATGCAGCGCAAGGCTTGTACAGGCAACACTAGCAATGTGCTTGTTCAGAATAATGAAAAGCAGATTTGTGTAACCAACAAAGGTAATTCAACTTCAAAAATGGATTCCAATAAACCAACTCGGACTTGGTCCTCAGAAAGTTTTACGGGATCAAAGAAGACAACAAACTATGGTGCTGTAAATGCTAACATTGAGCCCAAGAGGTCAAGAACAATGGTAACTGATACTCAAAAGGAGTTTCCAGTATCCAAAAGAAAGATCATTTCCGAAAATAAAAGGTATATCAGTAGGGATGTTCAGAATGAGGCAAGAGGTTCTGATAATGCAGCTAAATTTTTTGATAGCATGTCCATCAAATGCTTTGTTACAACTGATGGAAGTATTGACCAGGGTGCATTTAACATGAAAGAAAGCAAGGATGTGGTTTCATTTACATTTACATCTCCCTTGAGGAGAAGCATGCCTGAGTCACCATCCTCTACTGAGCAATTGATGGAAACAAAGAATGGAATTGATATCAATTCTCTTGATCATAGTGATAAGCTTTATCCGAAAGAAATATCATTATCTCCCAGGTCAGATATAATAGATGGTAATGATATAAGTTCCCTTCTGGACAAAAAGCTGCAAGAATTGACTTCTAGAATTAACTCATCTCAATGTACCTTGGCAACAGAAGGGTCATCTTCTGGTTTAAGATCAAGTTTGGAAGACAAATTCCACAGTTTGGTAAGCGCCATAGCAAGGGAACATGACAGAAGCTTTCATCCTCACCTTCTCGGTAATGAATTGGACAACATGTATGAAAATGGTTGTTCTTCAAGTCATAATTTGGTGCTTAAAATATATCAGAAACAGCAGACATCAGAACCAATGAAATGGCCTAGCTGTTGCAGCAGTGGTGAAAGTGGAAATGATCTAGGTTCTCCACATTCAAGAGCTGTTACAGATTTTGATAATCCTTTTGTCAATGGAAGTTACTTGGATCGTGAAGATATCGATACATATGGTAGCAGTGTCTATTGTTCCATGCAAAGTGAAGAAGTGTCTAATTCTTCTCTAATAAATGAATATGCATTACTTGAAAACGAGGTGAAATGGTATGAGAAAAGCTCGTCCACAGCGCCCGGGGGAAACACGACCATCAAAGAATTAATGTCAATACTTGTTGATTTCACAAGATCAACATGGAAGATCGAGCTTGAATATGTAAAGGATATACTAACCAATGCTGAGTTGATGGCAGAAGAATTTGTAGTGGGTCAAACAGATAAAATCATAACGCCAAATCTGTTCGATGTGTTGGAGAACCGTAGCAATGAGACAGAAAACTATAATAAAGAGTACTCTAAGCTTGAGAGGAAGGTTTTATTTGACACTATAAGTGAGTGCCTAGAATTAAGATGTAGGAAAGCTTTTGTTGGGAGCTGCAAAGGATGGCCTATATGGATGGCATCAGTTAAGAGGAAGAGTCGGTTGGCCGGAGAATTGTACAAGGAAGTACTTCGCTTTAAAAACGTGGAAGAAGAGACGATGGTGGTGGATGAGCTTGTTAGCAAGGACATGAGCATTGGATTGGGTACATGGCTTGACTTTGACATTGAAGCCTTCCAAGAGGGTTTAGATGTTGAGCTTGACATAGTAACATATTTGATCAATGAAATAGTTGTTGATTTGTTGTGTGTTTAA 2757 0.3935 MEIEKKRSKGSFLSFFDWNVKSRKKLFSDNPNLPEVSKQGKENLENVPKSQLNKMNVHDSGGNPSNIASCDVNYASSVNSDEGCGTQAPGLVARLMGLDSLPASTVSELSLSSTSLYGSNSLGSSHSHEGDDLHLMDDYYPMDYINMPLKVEKSSLVVMESKAHKVGTKRFQSEMLPPKSAKPIPVAHNELLSPVKSHGCIPPKNAVRVKADTKINEASSLPYMRNRMSSVGPSSVPVKNLDPTVKSESAQYVPKLVDQHTPNQGSDKSSEESNDLYKSTSTFKGSRDPVNNGSRHIVSKGKSVSLPTLSKGSVQRRATSILNGNRGYLKQKEKNKIKQNKLSMSQKKTTADQARVMQRKACTGNTSNVLVQNNEKQICVTNKGNSTSKMDSNKPTRTWSSESFTGSKKTTNYGAVNANIEPKRSRTMVTDTQKEFPVSKRKIISENKRYISRDVQNEARGSDNAAKFFDSMSIKCFVTTDGSIDQGAFNMKESKDVVSFTFTSPLRRSMPESPSSTEQLMETKNGIDINSLDHSDKLYPKEISLSPRSDIIDGNDISSLLDKKLQELTSRINSSQCTLATEGSSSGLRSSLEDKFHSLVSAIAREHDRSFHPHLLGNELDNMYENGCSSSHNLVLKIYQKQQTSEPMKWPSCCSSGESGNDLGSPHSRAVTDFDNPFVNGSYLDREDIDTYGSSVYCSMQSEEVSNSSLINEYALLENEVKWYEKSSSTAPGGNTTIKELMSILVDFTRSTWKIELEYVKDILTNAELMAEEFVVGQTDKIITPNLFDVLENRSNETENYNKEYSKLERKVLFDTISECLELRCRKAFVGSCKGWPIWMASVKRKSRLAGELYKEVLRFKNVEEETMVVDELVSKDMSIGLGTWLDFDIEAFQEGLDVELDIVTYLINEIVVDLLCV* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0626 918 Coils Coil 791 811 - -
Lan20g0626 918 Pfam DUF761-associated sequence motif 76 107 IPR032795 -
Lan20g0626 918 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 918 - -
Lan20g0626 918 Pfam Domain of unknown function (DUF4378) 756 910 IPR025486 -
Lan20g0626 918 MobiDBLite consensus disorder prediction 250 312 - -
Lan20g0626 918 MobiDBLite consensus disorder prediction 382 405 - -
Lan20g0626 918 MobiDBLite consensus disorder prediction 333 353 - -
Lan20g0626 918 MobiDBLite consensus disorder prediction 254 312 - -
Lan20g0626 918 Coils Coil 700 720 - -
Lan20g0626 918 PANTHER DUF4378 DOMAIN PROTEIN 1 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0626 Lan-Chr20 4939760 4943969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0626 3 916 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 28.693 1.76e-79 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0626 - - gmx:102665160 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0909 4 11083562 11088043 Lan20g0626 20 4939760 4943969 PCT
Lan16g1032 16 17524262 17528795 Lan20g0626 20 4939760 4943969 PCT
Lan20g0626 20 4939760 4943969 Lan4g0909 4 11083562 11088043 PCT
Lan20g0626 20 4939760 4943969 Lan16g1032 16 17524262 17528795 PCT