Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0608 ATGGCCTCCAAATCCAAAGCCGCGAAAACCTCCTCCGCTTCATCCCCGGCCACAGCCCCCTTCAACGCAGGTTCTGCTGTAGAGATCAGCTCCGACGACAACGGTTTCCGCGGTTCTCTGTTCACCGGCAAGATCATCCGCCGCCTCGCCAACGACCGGCTCTTGATCGAGTACGACAACCTCATTGCCGACGAGAGCGGTTCGAAGCGGTTGAGAGAGATCCTCAAACTTTACCAGCTCCGCCCGATTCCCCCGACGGAGAACAATCGGGAATTCAAGTTCGGCGATGAGGTTGACGCGTACCATAATGATGGGTGGTGGGAGGGTCACGTTACGGAAGAGTGTGGGAATGGAAAGTTCGCTGTATATTTCAGAGTTTCGAGGCAGCAGATCGTGTTCCATAAAGAAGAACTCAGACTCCACCGTGAGTGGTTCAATGAGAATTGGGTTCCTCCATTCCCACAGAAGCAAGAAGAGGAGAAAGTGTTGTTGACACCAAATGTGACGTCTGCTGAATCTGTGACATCAGATGTGAAGTCTGCTCAAACCGTGACACCAAATGTGAAGCCTGTTGAAATTGTGATCCGGGAGGAGAGGTTTAGTGTAGGGACACCAGTTGAGGTTAGCAGTGATGAAAAAGGTTACCAAGGAGCTTGGTTTTCTGCCACTGTTGTTCAAGTGATAGGAAAGAGAAAGTTCCTTGTTGAGTATCAGAGCCTACTTGCTGATGATGATTCACAGCTTTTGAGAGAGGAGGTTAATACCCACCACATAAGGCCTCGTCCGCCACAAACTGTTGTTGATGATCATTTTAGTCTTCTTGAAGAAGTGGATGCTTTTCACAAGGATGGCTGGTGGGTTGGCATGGTTTCTAAAGTTGTTGACAACTCACGGTATGTAGTTTACTTCAGGAACAGCAGTGAAGAACTAGAGTTTCAGCACTCCCAATTGAGGAAACACCAAGACTGGATTGATGGCAAATGGATCATGGCTTCGAAGGTATGGCATTATGACTGCACGCTAGAATAA 1029 0.4879 MASKSKAAKTSSASSPATAPFNAGSAVEISSDDNGFRGSLFTGKIIRRLANDRLLIEYDNLIADESGSKRLREILKLYQLRPIPPTENNREFKFGDEVDAYHNDGWWEGHVTEECGNGKFAVYFRVSRQQIVFHKEELRLHREWFNENWVPPFPQKQEEEKVLLTPNVTSAESVTSDVKSAQTVTPNVKPVEIVIREERFSVGTPVEVSSDEKGYQGAWFSATVVQVIGKRKFLVEYQSLLADDDSQLLREEVNTHHIRPRPPQTVVDDHFSLLEEVDAFHKDGWWVGMVSKVVDNSRYVVYFRNSSEELEFQHSQLRKHQDWIDGKWIMASKVWHYDCTLE* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0608 342 SMART agenet_At_2 90 146 IPR014002 -
Lan20g0608 342 SMART agenet_At_2 198 266 IPR014002 -
Lan20g0608 342 SMART agenet_At_2 269 325 IPR014002 -
Lan20g0608 342 SMART agenet_At_2 19 88 IPR014002 -
Lan20g0608 342 MobiDBLite consensus disorder prediction 1 22 - -
Lan20g0608 342 Gene3D - 190 271 - -
Lan20g0608 342 Pfam Agenet domain 203 263 IPR008395 -
Lan20g0608 342 Pfam Agenet domain 24 85 IPR008395 -
Lan20g0608 342 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 17 334 - -
Lan20g0608 342 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 17 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0608 Lan-Chr20 4806552 4808698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g0608 210 323 PHD Transcription Factor Family AT5G58610 29.104 2.90e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0608 - - lang:109346228 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0357 8 5711618 5714815 Lan20g0608 20 4806552 4808698 LSH
Lan20g0608 20 4806552 4808698 Lan4g1319 4 21998273 22003825 LSH